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Protein Alignment sv and npax-3
DIOPT Version :9
Sequence 1: | NP_524633.3 |
Gene: | sv / 43825 |
FlyBaseID: | FBgn0005561 |
Length: | 844 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_502006.2 |
Gene: | npax-3 / 187848 |
WormBaseID: | WBGene00011257 |
Length: | 205 |
Species: | Caenorhabditis elegans |
Alignment Length: | 184 |
Identity: | 54/184 - (29%) |
Similarity: | 76/184 - (41%) |
Gaps: | 55/184 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 HLTHHQQ-----QDVSPTLHNLQNTRTGDSLSTTINTNQNQHGHQHLSGSNMYTSSQMEDKSKAN 116
|...|:| .|:| |.|.||. :.|...:| :...|.|.|.|.:..|..
Worm 5 HCCDHEQCGSSVIDLS-TPHTLQR-----------DFNNWLNG---IEVPNSYESQQSDSSSSV- 53
Fly 117 KYDEYSSRTLSNISDANTTPSANNFITQSQGIEWITAMNDIQNGAEDSHSSQGSISGDGHGGVNQ 181
||..|:|.|. |:|. ||.::|...::.. |.|.
Worm 54 --DESGSKTSSP-----------------------TSMQ--QNPSQDGRKNRKK-------GTNL 84
Fly 182 LGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETG 235
.|..:..||||....|.||::|.:||::...||:.|.:||||||||:||:..||
Worm 85 YGRPYCPGRPLSMEERTRIIQLHNNGMKVNAISKSLCISHGCVSKIISRFRATG 138
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sv | NP_524633.3 |
PAX |
175..299 |
CDD:128645 |
28/61 (46%) |
npax-3 | NP_502006.2 |
PAX |
78..200 |
CDD:128645 |
28/68 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0849 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000011 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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