Protein Alignment sv and npax-2

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_508396.3
• Gene: npax-2 / 185967
• WormBaseID: WBGene00018591
• Length: 233
• Species: Caenorhabditis elegans
• Alignment Length: 292
• Identity: 76/292 - (26%)
• Similarity: 111/292 - (38%)
• Gaps: 100/292 - (34%)

  Fly    36 EETLNTSTGQ---------LEHDSQHLQQHHLTHHQQQDVSPTLHNLQNTRTGDSLSTTINTNQN 91
            |..::|||.:         |..|..:.......:|....::|.|
 Worm     3 EPVIDTSTPESLERDFMAWLNSDPTNTPIRKSVYHSSDSIAPAL--------------------- 46

  Fly    92 QHGHQHLSGSNMYTSSQMEDKSKANKYDEY-----------SSRTLSNIS-DANTTPSANNFITQ 144
                          .||..|..:|..|:.|           ||.:.|::. |....|.....:.:
 Worm    47 --------------ISQFTDAFEAGMYNPYYYPDTSDSGSPSSLSCSSLDYDVPPPPQYEKDVAR 97

  Fly   145 SQGIEWITAMNDIQNGAEDSHSSQGSISGDGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVR 209
            |                               .|.||||..:..|.||....|:.||:|...|.:
 Worm    98 S-------------------------------SGRNQLGRTYSPGLPLSMCEREEIVKLFQGGWK 131

  Fly   210 PCDISRQLRVSHGCVSKILSRYYETGSFKAGVIGGSKPKVA-----TPPVVDAIANYKRENPTMF 269
            .||||::|.|:|.||||||:||.:|||.        |||.|     ..|:|.|:.:|:.......
 Worm   132 ICDISKRLCVTHSCVSKILNRYRQTGSV--------KPKDAKEGRTESPLVLAVRDYRSRLGMCR 188

  Fly   270 AWEIRDRLLAEAICSQDNVPSVSSINRIVRNK 301
            ..|||::|:.:.:|::||.||.||||.|:|.|
 Worm   189 QSEIREQLIRDGVCTRDNAPSRSSINHILRTK 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	53/128 (41%)
npax-2	NP_508396.3	PAX	97..218	CDD:128645	54/159 (34%)