DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and Pax9

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_035171.1 Gene:Pax9 / 18511 MGIID:97493 Length:342 Species:Mus musculus


Alignment Length:269 Identity:121/269 - (44%)
Similarity:153/269 - (56%) Gaps:56/269 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 GGVNQLGGVFVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCVSKILSRYYETGSFKAGV 241
            |.|||||||||||||||:.:|.||||||..|:||||||||||||||||||||:||.||||...|.
Mouse     6 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGA 70

  Fly   242 IGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVPSVSSINRIVRNKAAEKA 306
            ||||||:|.||.||..|..||:.:|.:|||||||||||:.:|.:.||||||||:||:|||....|
Mouse    71 IGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKIGNLA 135

  Fly   307 KHVHH--HQQHHVSQSLGGGHIATESVDSSTGTIGEPQPPTSNSSANSVNTNVSASASVHASIPT 369
            :..|:  ::||..:                      |||....:...|..:.::|:|   |.:||
Mouse   136 QQGHYDSYKQHQPA----------------------PQPALPYNHIYSYPSPITAAA---AKVPT 175

  Fly   370 -SGTDSVQVSVGHINANSNETTHINSTAEQRT--TGYSINGILGIQ----------HGHHSHNNN 421
             .|..::..||                |..||  :.:|:..||||:          ..:||....
Mouse   176 PPGVPAIPGSV----------------ALPRTWPSSHSVTDILGIRSITDQGVSDSSPYHSPKVE 224

  Fly   422 NNSSVNNNN 430
            ..||:..||
Mouse   225 EWSSLGRNN 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 88/121 (73%)
Pax9NP_035171.1 PAX 6..131 CDD:238076 90/124 (73%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 7..63 45/55 (82%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 82..130 29/47 (62%)
Interaction with KDM5B. /evidence=ECO:0000250 168..189 9/39 (23%)

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