DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and RHOXF1

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_011529583.1 Gene:RHOXF1 / 158800 HGNCID:29993 Length:212 Species:Homo sapiens


Alignment Length:67 Identity:19/67 - (28%)
Similarity:27/67 - (40%) Gaps:11/67 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 FVNGRPLPDVVRQRIVELAHNGVRPCDISRQLRVSH----GCVSKILSRYYETGSFKAGVIGGSK 246
            ||.||..|.:.|    .|.|:.|..|....|:::|.    |..|   |.....|....|::|...
Human    20 FVQGRSAPAMAR----SLVHDTVFYCLSVYQVKISPTPQLGAAS---SAEGHVGQGAPGLMGNMN 77

  Fly   247 PK 248
            |:
Human    78 PE 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 19/67 (28%)
RHOXF1XP_011529583.1 homeodomain 132..190 CDD:238039
Blue background indicates that the domain is not in the aligned region.

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