DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and NOBOX

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_001073882.3 Gene:NOBOX / 135935 HGNCID:22448 Length:691 Species:Homo sapiens


Alignment Length:560 Identity:95/560 - (16%)
Similarity:156/560 - (27%) Gaps:222/560 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 VPSVSSINRIVR-NKAAEK---------------AKHVHHHQQHHVSQSLGGGHIATESVDSSTG 336
            :|.||....:.| .||.||               |.|....|              :|.:..|..
Human    86 IPLVSGKRELTRGQKAGEKPLAAGPGEEELLRGSAPHAQDTQ--------------SEELPPSCT 136

  Fly   337 TIGEPQPPTSNSSANSVNTN----VSASASVH------ASIPTSGTDSVQVSVGHINANSNETTH 391
            ..||.:||..:..|...:..    ...|.:.|      .|.|.:..:...:.||.:.....    
Human   137 ISGEKKPPAVSGEATGADAGRLCPPPRSRAPHKDRTLARSRPQTQGEDCSLPVGEVKIGKR---- 197

  Fly   392 INSTAEQRTTGYSINGILGIQHGHHSHNNNNNSSVNNNNNTESS-----CKRKRIEAHDEN---- 447
                        |.:...|.|...::......||....|:..::     |...|...|..|    
Human   198 ------------SYSPAPGKQKKPNAMGLAPTSSPGAPNSARATHNPVPCGSGRGPCHLANLLST 250

  Fly   448 -HDTNIHSDNDDG--------KRQRMSTYSGDQLYTNIWSGKWCIKDDHKLLAELGNLTASTGNC 503
             ..:|.:.|:..|        :::..:.|..|||           ::..|:..|           
Human   251 LAQSNQNRDHKQGPPEVTCQIRKKTRTLYRSDQL-----------EELEKIFQE----------- 293

  Fly   504 PATYY-------EASNGFSTTP----ISGSGATASGNDTSMLYDSITTISQTQSSIYTPAIGPSI 557
              .:|       |.:.....||    :.|:|:..:|....                     ||:|
Human   294 --DHYPDSDKRREIAQTVGVTPQRIMVKGAGSLVAGWSGG---------------------GPTI 335

  Fly   558 GTGSLTPLVPISMHEMKLSANSIQEQTVPPFYTALA---FDGNYTSMTSLENCSSLVGQEHIVMP 619
            .|             ::|.:..          :|:|   |.........:|..:....:::...|
Human   336 ET-------------LELQSER----------SAVAWVWFQNRRAKWRKMEKLNGKESKDNPAAP 377

  Fly   620 ESSDSNTLCPISTRIVPDITETNSTRVKEPLTNSDGCSEDNNKEPEKSNSSQSS--DHIASPHLH 682
            ..:.|.  |..:..|:|.:          |:            ||:.....|.|  |....|.: 
Human   378 GPASSQ--CSSAAEILPAV----------PM------------EPKPDPFPQESPLDTFPEPPM- 417

  Fly   683 HIGEEQLRGNRRSNLNASTHPSSLIPLQPSGGSSL-----LNINPSENRSDVELNLSNNVGLYST 742
                            ..|...:|.|.|||.|:..     |...|...|:|:...|    |...|
Human   418 ----------------LLTSDQTLAPTQPSEGAQRVVTPPLFSPPPVRRADLPFPL----GPVHT 462

  Fly   743 PTVLPSFNHYSAGCSSVVPGSDYAYNPAYTQYGGAYGSYG 782
            |.::|....        |.|||.::.      .|..||:|
Human   463 PQLMPLLMD--------VAGSDSSHK------DGPCGSWG 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 3/10 (30%)
NOBOXNP_001073882.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..233 27/168 (16%)
Homeodomain 273..361 CDD:459649 21/155 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 366..385 2/20 (10%)
PHA03247 <374..646 CDD:223021 36/174 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 394..437 14/81 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 635..691
Blue background indicates that the domain is not in the aligned region.

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