Protein Alignment sv and Crx

DIOPT Version :10

• Sequence 1: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Sequence 2: NP_001106801.1
• Gene: Crx / 12951
• MGIID: 1194883
• Length: 323
• Species: Mus musculus
• Alignment Length: 184
• Identity: 40/184 - (21%)
• Similarity: 64/184 - (34%)
• Gaps: 35/184 - (19%)

  Fly   226 KILSRYYETG-SFKAGVIGGSKPKV----ATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQ 285
            ||:..|...| .:....:..|.|.|    ...|...|....:||..|....::.:   .||:.::
Mouse    23 KIMMAYMNPGPHYSVNALALSGPNVDLMHQAVPYSSAPRKQRRERTTFTRSQLEE---LEALFAK 84

  Fly   286 DNVPSV--------------SSINRIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTG 336
            ...|.|              |.:....:|:   :||.....||....|...|............|
Mouse    85 TQYPDVYAREEVALKINLPESRVQVWFKNR---RAKCRQQRQQQKQQQQPPGAQTKARPAKRKAG 146

  Fly   337 TIGEPQPPTSNSSANSVNTN-VSASASVHASIP-TSGTDSVQVSVGHINANSNE 388
            |  .|:|.|      .|.|: :..|.|...|:| .||:.:..|:...|.:.::|
Mouse   147 T--SPRPST------DVCTDPLGISDSYSPSLPGPSGSPTTAVATVSIWSPASE 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sv	NP_524633.3	PAX	175..299	CDD:128645	17/91 (19%)
Crx	NP_001106801.1	Homeodomain	64..117	CDD:459649	9/58 (16%)
		TF_Otx	188..273	CDD:427350	1/5 (20%)