DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sv and Alx4

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_031468.1 Gene:Alx4 / 11695 MGIID:108359 Length:399 Species:Mus musculus


Alignment Length:438 Identity:78/438 - (17%)
Similarity:124/438 - (28%) Gaps:136/438 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 SHSSQGSISGDGHGGVNQLGGVFVN----GRPLPDVVRQRIVELAHNGVRPCDISRQLRVSHGCV 224
            |.|.:||....|..|.::.|..|::    |:...|...:     |..|....|::..|..|.|. 
Mouse    25 SQSREGSSPFRGFPGGDKFGTTFLSAGAKGQGFGDAKSR-----ARYGAGQQDLAAPLESSSGA- 83

  Fly   225 SKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAWEIRDRLLAEAICSQDNVP 289
                     .|||..  .....|....||...|        |....:      |....|   ..|
Mouse    84 ---------RGSFNK--FQPQPPTPQPPPAPPA--------PPAHLY------LQRGAC---KTP 120

  Fly   290 SVSSINRIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVD--SSTGTIGEPQPPTSNSSANS 352
            ...|:.                      .|...|||.|...|.  :....:|||:.|..:.....
Mouse   121 PDGSLK----------------------LQEGSGGHNAALQVPCYAKESNLGEPELPPDSEPVGM 163

  Fly   353 VNTNVSAS----------ASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYSING 407
            .|:.:|..          ||.....|...||| :.:.|  ....|.||.         |.|.:..
Mouse   164 DNSYLSVKETGAKGPQDRASAEIPSPLEKTDS-ESNKG--KKRRNRTTF---------TSYQLEE 216

  Fly   408 ILGI-QHGHHSHNNNNNSSVNNNNNTESSCKRKRIEAHDENHDTNIHSDNDDGKRQRMSTY---- 467
            :..: |..|:.............:.||:     |::...:|...........|:.|::.|:    
Mouse   217 LEKVFQKTHYPDVYAREQLAMRTDLTEA-----RVQVWFQNRRAKWRKRERFGQMQQVRTHFSTA 276

  Fly   468 ------SGDQLYTNIWSGKWCIKDDHKLLAELGNLTASTGNCPATYYEASNGFSTTPI------- 519
                  :..:.|..|.:..|           :|| ..:....||......      |:       
Mouse   277 YELPLLTRAENYAQIQNPSW-----------IGN-NGAASPVPACVVPCD------PVPACMSPH 323

  Fly   520 ---SGSGATASGNDTSMLYDSITTISQTQSSIYTPAIGPSIGTGSLTP 564
               .||||::        .....::|...|.:....:|...|...::|
Mouse   324 AHPPGSGASS--------VSDFLSVSGAGSHVGQTHMGSLFGAAGISP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 24/127 (19%)
Alx4NP_031468.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..133 17/115 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..206 7/37 (19%)
Homeodomain 203..259 CDD:459649 11/69 (16%)
OAR 375..393 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 379..392
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.