DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and esx1

DIOPT Version :10

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_031747349.1 Gene:esx1 / 116406733 XenbaseID:XB-GENE-29077183 Length:349 Species:Xenopus tropicalis


Alignment Length:346 Identity:60/346 - (17%)
Similarity:116/346 - (33%) Gaps:79/346 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 CSQD----NVPSVSSIN----RIVRNKAAEKAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIG 339
            ||::    ::||...::    ..:..||....|.:..:.|....:.|||.......:...|||. 
 Frog    13 CSKEPACQSLPSTQLLSPYFIDYILGKAPTDKKKIPGNIQQKPQEDLGGAGSPPAKILCKTGTA- 76

  Fly   340 EPQPPTSNSSANSVNTNVSASASVHASIPTSGTDSVQVSVGHINANSNETTHINSTAEQRTTGYS 404
                           |.:....|:...:......:|.|.|.            |...::..||..
 Frog    77 ---------------TKLRDGESMEKRLTGVMESTVGVEVA------------NEMCDEDRTGKK 114

  Fly   405 INGILGIQHGHHSHNNNNNSSVNNNNNTESSCKRKRIE-AHDENHDTNIHSDNDDGKRQRMSTYS 468
            |..:........|...:..........|.|:.:.:.:| |..::|..::.:..|...|..::   
 Frog   115 IEPVAKQSCALESSAPSGKRKQRRYRTTFSNLQLEELEMAFRKSHYPDVFTREDLAMRLDLT--- 176

  Fly   469 GDQLYTNIW----SGKWCIKDDHKLLAELGNLTAS-------TGNCPATYYEASNGFSTTPISG- 521
              :....:|    ..||..::..::|..:.....|       .||.|.|    .:.:.|.|:|. 
 Frog   177 --EARVQVWFQNRRAKWRKREKTEMLGGISGFPMSHPLGLYLDGNSPLT----DSAWKTVPLSTV 235

  Fly   522 -----SGATASGNDTSMLYDSITTISQTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQ 581
                 ..|.::....|:...:|:..:...|.:..|..|..:|.  |.||:..|        :.:.
 Frog   236 PLPSVMPALSTSPPGSLNLSNISWAALFSSPLLNPYFGRFLGV--LNPLMTTS--------SLLM 290

  Fly   582 EQTVPPFYTALAFDGNYTSMT 602
            |..:|      |.|.::|::|
 Frog   291 ENPIP------ASDSDFTALT 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 4/23 (17%)
esx1XP_031747349.1 Homeodomain 137..193 CDD:459649 10/60 (17%)
OAR 311..329 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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