DRSC/TRiP Functional Genomics Resources

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Protein Alignment sv and Cphx1

DIOPT Version :9

Sequence 1:NP_524633.3 Gene:sv / 43825 FlyBaseID:FBgn0005561 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_780551.1 Gene:Cphx1 / 105594 MGIID:2145733 Length:182 Species:Mus musculus


Alignment Length:181 Identity:41/181 - (22%)
Similarity:61/181 - (33%) Gaps:63/181 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 SKILSRYYETGSFKAGVIGGSKPKVATPPVVDAIANYKRENPTMFAW------EIRDRLLAEAIC 283
            ||...||   ||      ..|||:.....  |.:...|:|    ||:      ..:|.|..:..|
Mouse    17 SKARKRY---GS------RNSKPRHKFSR--DELKRLKQE----FAYAPYPDFTTKDELARQFQC 66

  Fly   284 SQDNVPSVSSINRIVRNKAAE-----KAKHVHHHQQHHVSQSLGGGHIATESVDSSTGTIGEPQP 343
                  .||.|:...:||.|.     |:|.....:.......:..||..|             ||
Mouse    67 ------EVSVIDNWFQNKRARLAPELKSKISAMRRMRRCQDYMRTGHQDT-------------QP 112

  Fly   344 PTSN----SSANSVNTNVSASASVHASIPTSGTDSVQVSVGHINANSNETT 390
            |.::    ||.:||             :.:.|..|:. :|.|..|...|::
Mouse   113 PKASGEQYSSCDSV-------------VRSIGRQSIG-TVEHQGAAGRESS 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
svNP_524633.3 PAX 175..299 CDD:128645 20/79 (25%)
Cphx1NP_780551.1 homeodomain 29..82 CDD:238039 16/64 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0849
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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