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Protein Alignment sv and pax5
DIOPT Version :9
Sequence 1: | NP_524633.3 |
Gene: | sv / 43825 |
FlyBaseID: | FBgn0005561 |
Length: | 844 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012808654.1 |
Gene: | pax5 / 100493222 |
XenbaseID: | XB-GENE-479876 |
Length: | 388 |
Species: | Xenopus tropicalis |
Alignment Length: | |
Identity: | / - (0%) |
Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sv | NP_524633.3 |
PAX |
175..299 |
CDD:128645 |
|
pax5 | XP_012808654.1 |
PAX |
15..139 |
CDD:128645 |
|
Pax2_C |
277..374 |
CDD:372091 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
231 |
1.000 |
Domainoid score |
I2385 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
268 |
1.000 |
Inparanoid score |
I2957 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D268681at33208 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48797 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45636 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X862 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.160 |
|
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