DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cals and clstn2b

DIOPT Version :10

Sequence 1:NP_001259086.1 Gene:Cals / 43824 FlyBaseID:FBgn0039928 Length:979 Species:Drosophila melanogaster
Sequence 2:XP_698154.5 Gene:clstn2b / 569664 ZFINID:ZDB-GENE-121214-77 Length:917 Species:Danio rerio


Alignment Length:993 Identity:269/993 - (27%)
Similarity:473/993 - (47%) Gaps:164/993 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LEKSYHGLIREN--ETLVEITPLIKVNEE-------KICNFHILKKPYHEIPFKIELVNNL---G 94
            :|.||||:|.||  |.|:: .||:.::::       :||.||:...   ..||:..|:|..   |
Zfish    29 IETSYHGVITENTDEVLLD-PPLVALDKDAPVPYAGEICGFHVQGL---SAPFEAVLLNGTSGEG 89

  Fly    95 ILKARRTLNCENRKSYHFEICAIYCDGTP-------SNTANVHITVIDVNEYAPTFLEPSYVIEV 152
            .|:||..::||..:.:.|.|.|..|...|       |:.|.|.:.|.||||::|.|.:..|...|
Zfish    90 RLRARGPIDCERHREFSFIIQAHDCGTGPQGHGQKRSHKAAVRVQVGDVNEFSPVFGQLEYHGSV 154

  Fly   153 DEGRLYNEILRVEASDKDCTPLFGDVCKYEILNNDEPFSIDNEGSIKNTEPLSHKASHNHILSVV 217
            .||::|:.||:|:|||:||:|.:..:|.|:|.:.|..|::|..|:|:|||.||.:...::.:.|.
Zfish   155 TEGKVYDSILQVQASDQDCSPQYSQICNYQITSPDTAFAVDRNGNIRNTESLSFEKKSHYKIRVT 219

  Fly   218 AYDC----AMKESAPIMVSIKVRRVCETKFVGMPERIDYTSGSTESLQLFPNARLDLCDISCKNE 278
            |.||    ||:|:   :|.|.|:.:|:..:.|..:.:||..|:...| |||...|:.|:.|..  
Zfish   220 ALDCGQKRAMQEA---IVHIHVKPICKPGWQGWRKLVDYEPGAGSKL-LFPKMHLETCEGSVS-- 278

  Fly   279 EDLRIHSSIALKTKHISFGCDRDIS---NCTSGQKVKDLLPHG---AEWTKELSYDEGLEP--IF 335
               .|.:::.|:|..:..|||.:.|   .|.|......|||..   ..||..|..|.|.:.  .:
Zfish   279 ---WIRTTVELETSGVGRGCDSERSLQKLCGSSSGSTALLPATGGVCNWTVTLVRDSGRDSDLAY 340

  Fly   336 HFDGSTGVVVPATVIDHYDFSSQPFSILTLFRHNSQVEINKHVKEHIVCSADDHKMNRHHMALFV 400
            .|||.....:|..|:.. :.:.| |:|.|..:|..... .:..||.::|::|..:|||||.:|:|
Zfish   341 RFDGHQAAKIPDWVVPQ-NLTDQ-FTITTWMKHGPSPG-QRAEKETLLCNSDKTEMNRHHYSLYV 402

  Fly   401 RNCRLIFLLRKNFNEGDLNIFSPAEWRWKIPEVCDNEWHHYVLNVEDSSKVDLFIDGVRFENSIE 465
            .||||:||||.::.:.|  .|.|||:.||:.::||.|||:|||:| |...|.|::|||.:|..: 
Zfish   403 HNCRLVFLLRTDYTQTD--SFRPAEFHWKLEQICDKEWHYYVLSV-DFPVVTLYVDGVTYEPYL- 463

  Fly   466 NRHSNPEVIDDWPLHAAHGVNTSLAIGACYQSLE---NRLKHGFNGDISEVKVSLNSVLTAEDIK 527
                   |.||||:|::. ::..|.:|||:|..|   .:....|.|.:|.:.:....:.:.:.|.
Zfish   464 -------VTDDWPIHSSQ-IDVQLTVGACWQGGEVSKAKFSQYFRGSLSGLTIRPGKIESQKIIS 520

  Fly   528 CGTTCAEHLLAPKPLQSNNEKSYSDNSQIKENIEMNEIYISAKNKHDIEQFMRKVQYINTKQKPT 592
            |...|.|      .|...:.::.....:...|...:.:.:.|::...:...:|||.|||::|.||
Zfish   521 CLQACKE------GLDITSLENLGQRIKFHLNPAQSVLVMEAEDLEQMNGALRKVSYINSRQFPT 579

  Fly   593 VGRRNIEVLTTLNCKNES-SLRLPPIETYIMVNEPIAPLGIDIDVVSASLETSDLTPPSYSPKIA 656
            :|.|::.:.|.:.|..|. .:.:|.||..:||.:|                        ...:|.
Zfish   580 MGSRHLRISTAVQCFGEDVCISVPDIEVVVMVMQP------------------------SEARIT 620

  Fly   657 ISGTSNKLVSYQEIKLGVHILEKTCIDSVSKNNGKLEEKNH----------IDSCSVVVF-PSLN 710
            |:|..:..:...::.||:.:.....|.|......|:...:|          :|.|.::|. ..|.
Zfish   621 ITGAEHLTIPAYDLALGLSLFRDLHIISTVTKRDKVTNMDHRSSAKETAHNLDYCDILVLGEELR 685

  Fly   711 PDHEDIKIDGDESLSSSMDIKTNINKDGVEMIGKDTISNYINVLRSLVYSNKKPAYYLNRVFKLS 775
            ...|.:::.....|...::...  :..|:.:.|.|:||:|..|:|.:.|.::: |....|.|:|:
Zfish   686 AGLESLELHHSALLGKHLEYAN--SSTGMSIYGVDSISHYTEVIRQVRYQSRR-AVDSVRTFRLT 747

  Fly   776 CAQQSSQYKSGEYTLTLTVLHPKQTLFKSTNVLPSSLSKVNFIGNTDNETSFHRNSGSVNGNDNN 840
            |::.:.:|.|.:|||.:.:||.::           :...||.:                    ..
Zfish   748 CSELNGRYTSDQYTLQVNILHSEE-----------AREHVNHL--------------------MT 781

  Fly   841 QPTESKVYSYSLLHTNNVQEPKSHIHSFIHKAEGSHVTMLIILVSVFLAVLLCGVSIARLKNNQK 905
            .|...::...:::.:||          :.:....:..|.::::....|.|:|.||.......|:.
Zfish   782 PPKSMQITHRTVMESNN----------YFNLVVPAVSTSVVVVCIAALLVVLLGVYQLNQTQNKD 836

  Fly   906 YIEHHQPCPKISDDGLIWDDSALTITINPMQ-------ADVTSDASSESE----NSESEDEEVAL 959
            .|:.|    .::::.:..:.|:|:||:||:|       |:||.:...|.:    ::||:.:|...
Zfish   837 SIQTH----TLAEEQVDCEGSSLSITVNPLQNCQELQSAEVTEEEEDEEDCAISSTESDSDEEET 897

  Fly   960 KDGFTH-INQLEWDNSNI 976
            ...||| ..:.:|..:.:
Zfish   898 DTPFTHRQTKQQWGKATL 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalsNP_001259086.1 Cadherin_repeat 45..138 CDD:206637 36/111 (32%)
CA_like 148..235 CDD:481204 36/90 (40%)
Laminin_G_3 <435..527 CDD:463865 30/94 (32%)
CLSTN_C 573..936 CDD:466150 76/374 (20%)
clstn2bXP_698154.5 Cadherin_repeat 32..140 CDD:206637 36/111 (32%)
Cadherin_repeat 149..241 CDD:206637 37/94 (39%)
LamG 397..508 CDD:473984 49/122 (40%)
CLSTN_C 530..863 CDD:466150 78/404 (19%)

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