DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cals and clstn2a

DIOPT Version :9

Sequence 1:NP_001259086.1 Gene:Cals / 43824 FlyBaseID:FBgn0039928 Length:979 Species:Drosophila melanogaster
Sequence 2:XP_009296983.1 Gene:clstn2a / 100125749 ZFINID:ZDB-GENE-070911-2 Length:944 Species:Danio rerio


Alignment Length:1019 Identity:322/1019 - (31%)
Similarity:502/1019 - (49%) Gaps:192/1019 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LEKSYHGLIREN-ETLVEITPLIKVNEE-------KICNFHILKKPYH--EIPFKIELVNNL--- 93
            :|.||||:|.|| :|::...||:.::::       :||.|.|     |  |.||:.|::|..   
Zfish    32 IETSYHGVITENMDTVMLDPPLVALDKDAPVPYAGEICAFKI-----HGQEAPFEAEVLNRTSGE 91

  Fly    94 GILKARRTLNCENRKSYHFEICAIYCDGTP-------SNTANVHITVIDVNEYAPTFLEPSYVIE 151
            |:|:||..::||.:|.|.|.|.|..|..:|       |:.|.|||.|.||||::|.|.||.|...
Zfish    92 GVLRARGPIDCEQQKEYTFIIQAYDCGASPNGADWKKSHKAVVHIQVDDVNEFSPVFREPLYRAT 156

  Fly   152 VDEGRLYNEILRVEASDKDCTPLFGDVCKYEILNNDEPFSIDNEGSIKNTEPLSHKASHNHILSV 216
            |.||::|:.||:|||.|:||:|.:..:|.|||:..|.||:||..|:|:|||.||.....::.:.|
Zfish   157 VTEGKIYDSILQVEAWDQDCSPQYSQICNYEIVTQDTPFAIDRNGNIRNTERLSFDKQQHYKIMV 221

  Fly   217 VAYDCAMK---ESAPIMVSIKVRRVCETKFVGMPERIDYTSGSTESLQLFPNARLDLCDISCKNE 278
            .||||..|   ||.|  |.|.|:.||:..:.|..:|:||..| |.|.||||...|:.||....: 
Zfish   222 TAYDCGQKRAMESVP--VHIDVKPVCKPGWQGWNKRVDYEPG-TGSKQLFPKMHLETCDGPLSS- 282

  Fly   279 EDLRIHSSIALKTKHISFGCDRDISNCTSGQKV-------KDLLP---HGAEWTKELSYDEGLEP 333
                :.:.:.|:|.||..||||:..:..|.||:       .||||   ....||..|..|.|.:.
Zfish   283 ----VRAMVELQTSHIGKGCDRETYSEKSLQKLCGAASGSTDLLPAPSTSTNWTASLLTDSGRDS 343

  Fly   334 --IFHFDGSTGVVVPATVIDHYDFSSQPFSILTLFRHNSQVEINKHVKEHIVCSADDHKMNRHHM 396
              ||.|||.....:|..|:.. :.:.| |:|.|..:|.....:... ||.::|::|..:|||||.
Zfish   344 DLIFRFDGRQAANIPDWVVPQ-NLTDQ-FTIATWMKHGPSPGLRAE-KETLLCNSDKTEMNRHHY 405

  Fly   397 ALFVRNCRLIFLLRKNFNEGDLNIFSPAEWRWKIPEVCDNEWHHYVLNVEDSSKVDLFIDGVRFE 461
            :|:|.||||:||||::|.:  |:.|.|||:.|::.::||.|||:||:|||..| |.||:|||.:|
Zfish   406 SLYVHNCRLVFLLRRDFIQ--LDSFRPAEFHWRLEQICDKEWHYYVINVEFPS-VTLFVDGVTYE 467

  Fly   462 NSIENRHSNPEVIDDWPLHAAHGVNTSLAIGACYQSLE---NRLKHGFNGDISEVKVSLNSVLTA 523
            ..:        |.||||:|.:. ::..|.:|||:|..|   .|....|.|.:|.:.:....:.|.
Zfish   468 PYL--------VTDDWPIHPSE-IDVQLTVGACWQGGEVTTPRFTQYFRGSLSGLTIRPGKIATQ 523

  Fly   524 EDIKCGTTCAEHLLAPKPLQSNNEKSYSDNSQIKENIEMNEIYISAKNKHDIEQFMRKVQYINTK 588
            :.|.|...|.|      .|..::.:|.....:...|...:.:.:.|.:...|...|.||.|||::
Zfish   524 KVISCLQACKE------GLDISSLESLGKGIKFHFNPAQSVLVMEADDLESINTAMTKVSYINSR 582

  Fly   589 QKPTVGRRNIEVLTTLNCKNESS-LRLPPIETYIMVNEPIAPLGIDIDVVSASLETSDLTPPSYS 652
            |.||.|.|.:.:.||:.|..|.: :.:|.|:..:||                       .||| .
Zfish   583 QFPTPGLRKLHITTTVQCFGEDTCISIPEIKAMVMV-----------------------LPPS-E 623

  Fly   653 PKIAISGTSNKLVSYQEIK--LGV------HILEK-TCID---SVSKNNGKLEEKNHIDSCSVVV 705
            |:|.|:|....:....:::  :||      ||:.. |..|   |:::..|.||..:::|.|.|:|
Zfish   624 PRITIAGVERLVWPSAQLRAPVGVALFKDIHIISTVTKTDATLSIARRPGVLELMHNLDYCDVLV 688

  Fly   706 F-PSLNPDHEDIKIDGDESLSSSMDIKTNINKDGVEMIGKDTISNYINVLRSLVYSNKKPAYYLN 769
            . ..|:|:.|.::|.....|...:| .|| :..|:.:.|.|::::|...:|.:.|.|.||.....
Zfish   689 IGEELDPERESLEIHHSSLLGKHLD-ATN-STSGISIYGVDSMAHYEQAIRQVRYRNWKPGSLSE 751

  Fly   770 RVFKLSCAQQSSQYKSGEYTLTLTVLHPKQTLFKSTNVLPSSLSKVNFIGNTDNETSFHRNSGSV 834
            |.|:|||::.:.:|.|.|:.|.:.|:|              |...|..:.:...::.|.|     
Zfish   752 RRFRLSCSELNGRYTSNEFNLEIGVVH--------------SSEAVEHVNHMAVQSQFMR----- 797

  Fly   835 NGNDNNQPTESKVYSYSLLHTNNVQEPKSHIHSFIHKAEGSHVTMLIILVSVFLA-VLLCGVSIA 898
                       .|:...::||.|    ..||       .|:.....:::|....| |::..:.|.
Zfish   798 -----------PVHHPLVVHTVN----SDHI-------SGTPPAATVVIVMCIAALVVIVVLGIY 840

  Fly   899 RL----KNNQKYIEHHQPCPKISDDGLIWDDSALTITINPMQA---------------------- 937
            |:    :::.|..|..:..|::.     ||:|.|.||:|||::                      
Zfish   841 RIHTTHQDSSKEDEEERKDPEMD-----WDNSNLNITVNPMESIEGTQIAEEVREEEPEEDEDED 900

  Fly   938 ----DVTSDASS-ESENSESEDEEVALKDGFTHINQLEWDNSNI 976
                |:..|.|| |||:|: ||||..::.|... .:||||.|.:
Zfish   901 EEDDDLAGDLSSAESEDSD-EDEETNIQKGKVK-GKLEWDPSTL 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalsNP_001259086.1 Cadherin_repeat 45..138 CDD:206637 41/112 (37%)
Cadherin_repeat 147..238 CDD:206637 42/93 (45%)
LamG <435..527 CDD:304605 34/94 (36%)
clstn2aXP_009296983.1 Cadherin_repeat 35..143 CDD:206637 41/112 (37%)
Cadherin_repeat 153..244 CDD:206637 42/92 (46%)
LamG 404..515 CDD:304605 52/122 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594939
Domainoid 1 1.000 276 1.000 Domainoid score I1705
eggNOG 1 0.900 - - E1_KOG1834
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49698
Inparanoid 1 1.050 410 1.000 Inparanoid score I1844
OMA 1 1.010 - - QHG48981
OrthoDB 1 1.010 - - D155997at33208
OrthoFinder 1 1.000 - - FOG0001333
OrthoInspector 1 1.000 - - otm24977
orthoMCL 1 0.900 - - OOG6_103241
Panther 1 1.100 - - O PTHR14139
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3174
SonicParanoid 1 1.000 - - X826
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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