DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Arf102F and ARF1

DIOPT Version :9

Sequence 1:	NP_001259087.1	Gene:	Arf102F / 43823	FlyBaseID:	FBgn0013749	Length:	180	Species:	Drosophila melanogaster
Sequence 2:	NP_010089.1	Gene:	ARF1 / 851335	SGDID:	S000002351	Length:	181	Species:	Saccharomyces cerevisiae

Alignment Length:	177	Identity:	131/177 - (74%)
Similarity:	151/177 - (85%)	Gaps:	0/177 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            |||..|.|.:.|||.|:|||||||||.|||||:||||||||::|||||||||||||:||||.|||
Yeast     1 MGLFASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            |||||||:||.|||||::||:|:|||||||||.||.||...:|.||.|||||:|..|||||||||
Yeast    66 WDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDL 130

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177
            |.||:|||:|:||.|:.:|||.||||:||||.|.||||||:|||..|
Yeast   131 PEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSL 177

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Arf102F	NP_001259087.1	YlqF_related_GTPase	1..180	CDD:424112	131/177 (74%)
ARF1	NP_010089.1	P-loop_NTPase	5..179	CDD:422963	128/173 (74%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	292	1.000	Domainoid score	I232
eggNOG	1	0.900	-	-		E2759_KOG0070
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S45
OMA	1	1.010	-	-		QHG53833
OrthoFinder	1	1.000	-	-		FOG0000118
OrthoInspector	1	1.000	-	-		mtm9165
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11711
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.870