DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and SAR1B

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_176029.1 Gene:SAR1B / 842086 AraportID:AT1G56330 Length:193 Species:Arabidopsis thaliana


Alignment Length:174 Identity:56/174 - (32%)
Similarity:87/174 - (50%) Gaps:16/174 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWR 79
            :|:.:||.:|||.|||||:|:.||...:|...||.....|.:....|.|..:|:||....|.:|:
plant    18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWK 82

  Fly    80 HYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLR 144
            .|:.....::::||:.|::|..|::|||..:|.::.|.....|:..||.|:|.|.:..||...|.
plant    83 DYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLG 147

  Fly   145 LNQ--------------LRNRHWFIQSTCATQGHGLYEGLDWLS 174
            |..              :|....|:.|.....|:|  ||..|||
plant   148 LTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYG--EGFKWLS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 56/174 (32%)
SAR1BNP_176029.1 SAR 4..192 CDD:197556 56/174 (32%)

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