DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and ARFD1B

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_171745.3 Gene:ARFD1B / 839242 AraportID:AT1G02430 Length:190 Species:Arabidopsis thaliana


Alignment Length:185 Identity:84/185 - (45%)
Similarity:124/185 - (67%) Gaps:14/185 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVETVEYKNICFT 64
            ||..:.......|.:::.||::.|||||||::|::|||.|| :.||:||||.:||:|:||:....
plant     1 MGTALGKPFAGFFHQEESRIVLFGLDAAGKSSIMHKLKTGETLTTTMPTIGTDVESVKYKDSNLR 65

  Fly    65 VWDVGGQD--KIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAV-----LL 122
            .|::|||.  |..|:.:|.||...||:.||||.|||||.:|:..|..::  ||::.:|     :|
plant    66 FWEMGGQQCYKWFPMTKHDFQEIAGLVLVVDSTDRDRIEDAKDFLNAVI--DEIQGSVPDNVAVL 128

  Fly   123 VFANKQDLPNAMTAAELTDKLRLNQLR----NRHWFIQSTCATQGHGLYEGLDWL 173
            ||.||.::|.||:|:|:::||.|..||    .|:|.:||:||..|.||:||||||
plant   129 VFGNKHEVPGAMSASEISNKLDLTSLRQKNWQRNWHVQSSCAFSGDGLHEGLDWL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 84/185 (45%)
ARFD1BNP_171745.3 Arf_Arl 19..186 CDD:206644 81/167 (49%)

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