DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and ARFD1A

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_563652.1 Gene:ARFD1A / 839230 AraportID:AT1G02440 Length:190 Species:Arabidopsis thaliana


Alignment Length:187 Identity:82/187 - (43%)
Similarity:123/187 - (65%) Gaps:18/187 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGE-IVTTIPTIGFNVETVEYK--NIC 62
            ||.|:.......|.:::.||::.||...||::|::|.|.|| :.||:||:|.|||:|:||  |:|
plant     1 MGTTLGKPFAGFFHQEEARIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYKDSNLC 65

  Fly    63 FTVWDVGGQDKIR--PLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAV----- 120
            |  |::|||....  |||:|:||...||:.||||..||:|.|.:..|..::  ||::.:|     
plant    66 F--WEMGGQQCYMWFPLWKHWFQEIAGLVLVVDSTGRDQIEETKDFLNVVI--DEIQGSVPDNAP 126

  Fly   121 LLVFANKQDLPNAMTAAELTDKLRLNQLR----NRHWFIQSTCATQGHGLYEGLDWL 173
            :||:.||.::|.||:|:|:::||.|..||    .|:|.:||:||..|.||:||||||
plant   127 VLVYGNKHEVPGAMSASEISNKLDLTSLRKKNWQRNWHVQSSCAFSGDGLHEGLDWL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 82/187 (44%)
ARFD1ANP_563652.1 Arf_Arl 19..186 CDD:206644 78/169 (46%)

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