DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf102F and ARFB1C

DIOPT Version :9

Sequence 1:NP_001259087.1 Gene:Arf102F / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_186962.1 Gene:ARFB1C / 821079 AraportID:AT3G03120 Length:192 Species:Arabidopsis thaliana


Alignment Length:177 Identity:109/177 - (61%)
Similarity:142/177 - (80%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            ||.|...|....||.::||::|:||||||||||||||.:||:::|:||||||||.|:|||:.|||
plant     1 MGQTFRKLFDTFFGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||||||:|:||||||||.||.|||:||||.||:||.:|::|.|:::::..:.::|:||||||||:
plant    66 WDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQDIIRDPFMLNSVILVFANKQDM 130

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177
            ..||:..|:.:.|.|..|:||.|.||.|||.||.|||||||||||.|
plant   131 RGAMSPREVCEGLGLLDLKNRKWHIQGTCALQGDGLYEGLDWLSATL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf102FNP_001259087.1 YlqF_related_GTPase 1..180 CDD:424112 109/177 (62%)
ARFB1CNP_186962.1 Arf1_5_like 18..176 CDD:206717 101/157 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11711
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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