DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and Arl13a

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_083223.1 Gene:Arl13a / 74448 MGIID:1921698 Length:372 Species:Mus musculus


Alignment Length:182 Identity:49/182 - (26%)
Similarity:84/182 - (46%) Gaps:29/182 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKQMRILMVGLDAAGKTTILYKL----------KLGEIVTTIPTIGFNVETVEYKNICFTVWDVG 69
            ::.:.|:::|||.:||:.::...          ::....||:....:.|          :::|:.
Mouse    19 QRNVTIIVIGLDNSGKSRLIEAFQRLIPSKMHKEMRPTQTTLLLDDYQV----------SIYDLT 73

  Fly    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAM 134
            |..|.|..|..|:....||||||||:|..||.|.:..|..::.:..:....:|:.|||||..||:
Mouse    74 GDVKGREKWSSYYAQAHGLIFVVDSSDIARIQEVKIILTRIMFDKRVSGKPILILANKQDKKNAL 138

  Fly   135 TAAELTDKLRLNQLRN--RHWFIQSTCAT-------QGHGLYEGLDWLSAEL 177
            ...::.:.|.|.:|.|  |.......|:|       |...:..||.||.|.:
Mouse   139 LPCDIIEYLLLERLVNETRSMCRVEPCSTIKRIPKRQQKPIVVGLRWLLAAI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 49/182 (27%)
Arl13aNP_083223.1 Arl2l1_Arl13_like 23..189 CDD:133361 48/175 (27%)

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