DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and Arl1

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_071780.1 Gene:Arl1 / 64187 RGDID:621326 Length:181 Species:Rattus norvegicus


Alignment Length:180 Identity:104/180 - (57%)
Similarity:135/180 - (75%) Gaps:0/180 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            ||...||:.:.|||.::||||::|||.||||||||:|::||:||||||||||||||.|||:.|.|
  Rat     1 MGGFFSSIFSSLFGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||:|||..|||.||.|:.||..:|:||||.|||||..::.||..||:|:|||.|:|:|||||||:
  Rat    66 WDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDM 130

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            ..|||.:|:.:.|.|..|::|.|.|..|.||:|.||.|.::||...|..:
  Rat   131 EQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 104/178 (58%)
Arl1NP_071780.1 Arl1 19..176 CDD:206718 95/156 (61%)

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