DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and sar1ab

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001017882.1 Gene:sar1ab / 550581 ZFINID:ZDB-GENE-050417-437 Length:198 Species:Danio rerio


Alignment Length:184 Identity:60/184 - (32%)
Similarity:97/184 - (52%) Gaps:18/184 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLLTRLFG--KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVG 69
            |.:.:|.|  ||..:::.:|||.|||||:|:.||...:...:||:....|.:....:.||.:|:|
Zfish    13 SNVLQLLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELSIAGMTFTTFDLG 77

  Fly    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAM 134
            |..:.|.:||:|.....|::::||..|.:|:.||:.||..:|.::.:.:..:|:..||.|.|.|:
Zfish    78 GHAQARRVWRNYLPAINGIVYLVDCADHERLQEAKIELDALLTDETISNVPILILGNKIDRPKAI 142

  Fly   135 TAAEL----------TDK----LRLNQLRNRHWFIQSTCATQGHGLYEGLDWLS 174
            :...|          |.|    |:...||....|:.|....||:|  ||..|||
Zfish   143 SEDALRGMFGLYGHTTGKGNVSLKELNLRPMEVFMCSVLKRQGYG--EGFRWLS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 60/184 (33%)
sar1abNP_001017882.1 Sar1 3..197 CDD:206645 60/184 (33%)

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