DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl3a

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_068068946.1 Gene:arl3a / 550525 ZFINID:ZDB-GENE-050417-368 Length:198 Species:Danio rerio


Alignment Length:176 Identity:77/176 - (43%)
Similarity:114/176 - (64%) Gaps:2/176 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLLTRLFG--KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVG 69
            |:|.:|..  .:::|||::|||..||||:|.:|...:|....||.|||:::|:.:.....|||:|
Zfish    21 SILRKLKSAPDQEVRILLLGLDNGGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIG 85

  Fly    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAM 134
            ||.||||.||:||:||..||:|:||.||.|..|..:||..:|.|::|....:|:|||||||..|.
Zfish    86 GQRKIRPYWRNYFENTDMLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAA 150

  Fly   135 TAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            .|:|:.:.|.|:.:|:|.|.|||..|..|.|:.:|:.|:...:..|
Zfish   151 PASEIAEGLNLHIIRDRMWQIQSCSALTGEGVQDGMSWVCKNVTAK 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 76/174 (44%)
arl3aXP_068068946.1 Arl3 19..192 CDD:206721 76/170 (45%)

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