DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf102F and arf4b

DIOPT Version :9

Sequence 1:NP_001259087.1 Gene:Arf102F / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001017707.1 Gene:arf4b / 550402 ZFINID:ZDB-GENE-050417-205 Length:180 Species:Danio rerio


Alignment Length:180 Identity:135/180 - (75%)
Similarity:156/180 - (86%) Gaps:0/180 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            ||:..|:|.||||.||:||:||||||||||||:||||||||:||||||:|||||||||:||.|||
Zfish     1 MGVFFSNLWTRLFEKKEMRLLMVGLDAAGKTTVLYKLKLGEVVTTIPTLGFNVETVEYRNISFTV 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            |||||||.||.|||||:|||:||||||||:|||||..|..||:.||.|||:|||||||.||||||
Zfish    66 WDVGGQDIIRRLWRHYYQNTKGLIFVVDSSDRDRIETAAEELKMMLAEDEMRDAVLLVLANKQDL 130

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            |.||.|.|||::|.|:.||.|.||:|||||.||.|||||||||:.:|:|:
Zfish   131 PKAMAAHELTERLGLHALRGRQWFVQSTCAVQGSGLYEGLDWLTDQLSKR 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf102FNP_001259087.1 YlqF_related_GTPase 1..180 CDD:424112 134/178 (75%)
arf4bNP_001017707.1 P-loop_NTPase 1..180 CDD:304359 134/178 (75%)
SAR 15..174 CDD:197556 124/158 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581993
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 1 1.010 - - D1362554at2759
OrthoFinder 1 1.000 - - FOG0000118
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.860

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