DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and Arl8b

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001019503.1 Gene:Arl8b / 500282 RGDID:1562830 Length:186 Species:Rattus norvegicus


Alignment Length:173 Identity:58/173 - (33%)
Similarity:99/173 - (57%) Gaps:4/173 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISSLL---TRLFGKKQMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNICFTV 65
            ||.||   ..||.|::|.:.:|||..:||||.:..:..|:. ...|||:|||:..|...|:...:
  Rat     5 ISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKI 69

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||:|||.:.|.:|..|.:....:::::|:.||::|..:..||.|:|.:.:|:...:||..||:||
  Rat    70 WDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDL 134

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWL 173
            |||:...:|.:|:.|:.:::|.....|....:...:...|.||
  Rat   135 PNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 58/173 (34%)
Arl8bNP_001019503.1 Arl10_like 22..180 CDD:206724 50/156 (32%)

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