DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and Arl8a

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001102541.1 Gene:Arl8a / 498234 RGDID:1565940 Length:186 Species:Rattus norvegicus


Alignment Length:163 Identity:52/163 - (31%)
Similarity:94/163 - (57%) Gaps:1/163 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LFGKKQMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKNICFTVWDVGGQDKIR 75
            ||.|::|.:.:|||..:||||.:..:..|:. ...|||:|||:..:...|:...:||:|||.:.|
  Rat    15 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFR 79

  Fly    76 PLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELT 140
            .:|..|.:....::::||:.|:::|..::.||.|:|.:.:|:...:||..||:||..|:...||.
  Rat    80 SMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKELI 144

  Fly   141 DKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWL 173
            :|:.|:.:::|.....|....:...:...|.||
  Rat   145 EKMNLSAIQDREICCYSISCKEKDNIDITLQWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 52/163 (32%)
Arl8aNP_001102541.1 Arl10_like 22..180 CDD:206724 48/156 (31%)

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