DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl4a

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001006711.1 Gene:arl4a / 448350 XenbaseID:XB-GENE-5783083 Length:200 Species:Xenopus tropicalis


Alignment Length:189 Identity:79/189 - (41%)
Similarity:119/189 - (62%) Gaps:9/189 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISS---LLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY---- 58
            ||..:|.   :|:.|...:.:.|.::|||.|||||:||:|:..|.|.|:||.|||.|.::.    
 Frog     1 MGNGLSEQTPILSGLSPFQALHIAILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNAEKIKVSLGN 65

  Fly    59 -KNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLL 122
             |.:.|..||||||:|:||||:.|.:.|.|::|||||.|.:|:.||:.||..:.:..|.:...:|
 Frog    66 SKTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSVDAERMEEAKTELHKITKISENQGVPVL 130

  Fly   123 VFANKQDLPNAMTAAELTDKLRLNQL-RNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            :.||||||.|::|.:|:...|.||:. .:..|.:|:|||..|.||.||::.|...:.|:
 Frog   131 IVANKQDLRNSLTLSEIEKLLALNEFGSSTPWHLQATCAIIGDGLREGIEKLYEMIIKR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 78/187 (42%)
arl4aNP_001006711.1 Arl4_Arl7 18..200 CDD:206719 74/172 (43%)

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