DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl5a

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001002339.1 Gene:arl5a / 436611 ZFINID:ZDB-GENE-040718-28 Length:179 Species:Danio rerio


Alignment Length:177 Identity:81/177 - (45%)
Similarity:119/177 - (67%) Gaps:1/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            ||: |.:.|.|||..::.::::||||.||||||||:..:.|:|.|.||||.|||.:...|..|.:
Zfish     1 MGI-IFTKLWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTHFLM 64

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||:|||:.:|..|..|:.||:.:|.||||.||:||:....||..||..::|:.|.||:||||||:
Zfish    65 WDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYRMLAHEDLKKAGLLIFANKQDV 129

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177
            ...:|.||::..|:|..:::..|.||:.||..|.||.:||:|:.:.|
Zfish   130 KGCLTVAEISQSLQLTSVKDHQWHIQACCALTGEGLCQGLEWMMSRL 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 81/177 (46%)
arl5aNP_001002339.1 Arl5_Arl8 3..175 CDD:133353 78/172 (45%)

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