DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl4aa

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_957154.1 Gene:arl4aa / 393834 ZFINID:ZDB-GENE-040426-1878 Length:200 Species:Danio rerio


Alignment Length:189 Identity:79/189 - (41%)
Similarity:117/189 - (61%) Gaps:9/189 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTIS---SLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV-----E 57
            ||..||   :.|:.|.....:.|.::|||:|||||:||:|:..|.|.|:||.|||.|.|     :
Zfish     1 MGNGISDQPNFLSSLPFCNSLHIAILGLDSAGKTTVLYRLQFNEFVNTVPTRGFNAEKVRIPVGD 65

  Fly    58 YKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLL 122
            .:.:.|..||||||:|:||||:.|.:.|.|::|||||.|.:|:.||:.||..:.:..|.:...:|
Zfish    66 SRTVTFHFWDVGGQEKLRPLWKSYTRCTDGIVFVVDSLDAERMEEAKTELYKIARSTENQGVPVL 130

  Fly   123 VFANKQDLPNAMTAAELTDKLRLNQL-RNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            :.|||||:..|:..:::...|.||:| .:..|.:|.|||..|.||.|||:.|...:.|:
Zfish   131 IIANKQDMRQALPLSQIETMLALNELGPSTPWHLQPTCAIIGDGLKEGLERLHDMIVKR 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 78/187 (42%)
arl4aaNP_957154.1 Arl4_Arl7 20..193 CDD:206719 73/170 (43%)

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