DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl3l1

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_956987.1 Gene:arl3l1 / 393666 ZFINID:ZDB-GENE-040426-1649 Length:187 Species:Danio rerio


Alignment Length:176 Identity:74/176 - (42%)
Similarity:115/176 - (65%) Gaps:2/176 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLLTRLFG--KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVG 69
            |::.:|.|  ::::||:::|||.|||||:|.:|...::.|..||.|||:::|....:...|||:|
Zfish    10 SVIEKLKGTTEQELRIVLLGLDNAGKTTLLKQLASEDVNTITPTQGFNIKSVTCDGMKLNVWDIG 74

  Fly    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAM 134
            ||.||||.|:.|.:||..||:|:||.|:.|..|...||..::.|:.|:...||:|||||||..|.
Zfish    75 GQRKIRPFWKKYLENTDLLIYVIDSADKKRFEETGLELSELIDEENLKGVPLLIFANKQDLATAS 139

  Fly   135 TAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            .|:|:.:.|.|:..|:|.|.||:..|..|.|:.:|::|:|..:..|
Zfish   140 PASEIAEGLNLHTYRDREWQIQACSAVSGEGVQDGMNWISNNIVNK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 73/174 (42%)
arl3l1NP_956987.1 Arl3 8..181 CDD:206721 73/170 (43%)

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