DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and Arl6

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001102312.1 Gene:Arl6 / 363760 RGDID:1305535 Length:187 Species:Rattus norvegicus


Alignment Length:175 Identity:72/175 - (41%)
Similarity:115/175 - (65%) Gaps:9/175 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLTRLFG-----KKQMRILMVGLDAAGKTTILYKLK--LGEIVTTIPTIGFNVETVEYKNICFTV 65
            ||.||.|     ||::.:|.:|||.:|||||:.|||  ..::...:|||||::|..:..::.|||
  Rat     3 LLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQVQDIVPTIGFSIEKFKSSSLSFTV 67

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDEL--RDAVLLVFANKQ 128
            :|:.||.:.|.||.||:::.|.:||||||:|:.|:..|:.||..:|...::  |...:|.||||.
  Rat    68 FDMSGQGRYRNLWEHYYKDGQAIIFVVDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKM 132

  Fly   129 DLPNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWL 173
            ||.:|:|:.:::..|.|..::::.|.|.::.|.:|.||.||:|||
  Rat   133 DLRDAVTSVKVSQLLCLENIKDKPWHICASDALKGEGLQEGVDWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 72/175 (41%)
Arl6NP_001102312.1 Arl6 19..178 CDD:206722 65/159 (41%)

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