DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arf4 and arl8

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_956118.1 Gene:arl8 / 327551 ZFINID:ZDB-GENE-030131-5762 Length:179 Species:Danio rerio


Alignment Length:175 Identity:79/175 - (45%)
Similarity:117/175 - (66%) Gaps:1/175 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            |||..:.|.: .|..::.::::||||.||||||||:..:.|:|.|.||||.|||.:..|...|.:
Zfish     1 MGLIFAKLWS-FFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKKTHFLM 64

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||:|||:.:|..|..|:.||:.:|.||||.||:|:..::.||..||..::||.|.:|:||||||:
Zfish    65 WDIGGQESLRSSWNTYYSNTEFIILVVDSTDRERLAISKEELYRMLAHEDLRKAAVLIFANKQDM 129

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSA 175
            ...|:|||:...|.|:.:::..|.|||.||..|.||..||:|:::
Zfish   130 KGCMSAAEIYKYLTLSSIKDHPWHIQSCCALTGEGLCRGLEWMTS 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 79/175 (45%)
arl8NP_956118.1 Arl5_Arl8 3..175 CDD:133353 77/173 (45%)

Return to query results.
Submit another query.