DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl13b

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_775379.2 Gene:arl13b / 286784 ZFINID:ZDB-GENE-021217-3 Length:407 Species:Danio rerio


Alignment Length:173 Identity:56/173 - (32%)
Similarity:96/173 - (55%) Gaps:9/173 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRH 80
            :::.::|||||.||||..:..::....:...||:||:...::......|::|:||..:||.:|::
Zfish    20 RKVTLVMVGLDNAGKTATVRGIQGESPLDVAPTVGFSKVDLKQGKFEVTIFDLGGGKRIRGIWKN 84

  Fly    81 YFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRL 145
            |:..:.|::|||||:|..||.|....:..:|:...:....:||.|||||...||..|::.:.|.|
Zfish    85 YYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEADIIETLSL 149

  Fly   146 NQLRNRH---WFIQSTCATQGHG------LYEGLDWLSAELAK 179
            .:|.|.:   ..|:...|..|:|      :..||:||...:||
Zfish   150 EKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNIAK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 56/173 (32%)
arl13bNP_775379.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..407
Blue background indicates that the domain is not in the aligned region.

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