DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and Arl5c

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_997114.1 Gene:Arl5c / 217151 MGIID:3028577 Length:179 Species:Mus musculus


Alignment Length:176 Identity:76/176 - (43%)
Similarity:115/176 - (65%) Gaps:1/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            ||..|:.|: |:||.::.::::||||.||||||||:....|:|.|..|||.|||.:..:...|.:
Mouse     1 MGQLIAKLM-RIFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHTCSTIGSNVEEIVLRKTHFLM 64

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||:|||:.:|..|..|:.|.:.:|.|:||.||:|:.....||..||..:.|::|.:|:||||||:
Mouse    65 WDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQDV 129

  Fly   131 PNAMTAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAE 176
            .::||.||::..|.|:.:::..|.||..||..|.||..||.|:.|:
Mouse   130 KDSMTTAEISQFLTLSAIKDHPWHIQGCCALTGEGLPAGLQWMQAQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 76/176 (43%)
Arl5cNP_997114.1 Arl5_Arl8 3..172 CDD:133353 72/169 (43%)

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