DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and evl-20

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_495779.1 Gene:evl-20 / 191632 WormBaseID:WBGene00001358 Length:184 Species:Caenorhabditis elegans


Alignment Length:167 Identity:72/167 - (43%)
Similarity:110/167 - (65%) Gaps:2/167 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNICFTVWDVGGQDKIRPLW 78
            :::||||::|||.|||||::.|. |.|...|| ||:||:::||.:|:....:||||||..:|..|
 Worm    14 EREMRILILGLDNAGKTTLMKKF-LDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYW 77

  Fly    79 RHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKL 143
            ::||::|..||:||||:||:|:.:...||:.:|.|:.|..|.|||.|||.|||.|:....:...|
 Worm    78 KNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASLLVLANKSDLPGAIDVNSIAQVL 142

  Fly   144 RLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAELAKK 180
            .|:.:::.||.|.|.||..|..|.:.:.||..::..:
 Worm   143 DLHSIKSHHWKIFSCCALSGDRLVQAMTWLCDDVGSR 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 72/165 (44%)
evl-20NP_495779.1 Arl2 3..175 CDD:206720 72/161 (45%)

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