DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arf-6

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_503011.1 Gene:arf-6 / 191608 WormBaseID:WBGene00000184 Length:175 Species:Caenorhabditis elegans


Alignment Length:170 Identity:109/170 - (64%)
Similarity:141/170 - (82%) Gaps:0/170 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVG 69
            :...|:::||||::||||:|||||||||||||||||:.||||||:|||||||.||||.|.|||||
 Worm     1 MGKFLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVG 65

  Fly    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAM 134
            ||||||||||||:..||.||||:|:.||||:.||..||..::.:.|:::|::|||||||||.:||
 Worm    66 GQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAM 130

  Fly   135 TAAELTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLS 174
            ...|:.|||.|.::|:|:|::|.:||:.|.||:|||.|||
 Worm   131 KPHEIQDKLGLTRIRDRNWYVQPSCASTGDGLHEGLTWLS 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 109/170 (64%)
arf-6NP_503011.1 Arf6 5..172 CDD:206716 109/166 (66%)

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