DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and sar-1

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_500582.1 Gene:sar-1 / 177217 WormBaseID:WBGene00022678 Length:193 Species:Caenorhabditis elegans


Alignment Length:176 Identity:55/176 - (31%)
Similarity:97/176 - (55%) Gaps:16/176 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRH 80
            |:.:::.:|||.|||||:|:.||...|...:||:....|.:....|.||.:|:||..:.|.:|:.
 Worm    20 KKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKD 84

  Fly    81 YFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRL 145
            ||.....::|::|..|.:|:.|:..||:::||::::....:|:..||.|.|.|::..:|..:|.:
 Worm    85 YFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNI 149

  Fly   146 ------------NQLRNR--HWFIQSTCATQGHGLYEGLDWLSAEL 177
                        |::.:|  ..|:.|....||:|  ||:.||...|
 Worm   150 QHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYG--EGIRWLGQYL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 55/176 (31%)
sar-1NP_500582.1 Sar1 3..193 CDD:206645 54/174 (31%)

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