DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl-5

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001379051.1 Gene:arl-5 / 176392 WormBaseID:WBGene00000189 Length:178 Species:Caenorhabditis elegans


Alignment Length:178 Identity:83/178 - (46%)
Similarity:113/178 - (63%) Gaps:1/178 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTV 65
            |||.::.|....:..|:.:|::||||.||||||||.....:.|.|.||||.|||.|.|:|:.|.:
 Worm     1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVI 65

  Fly    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDL 130
            ||:|||:.:|..|..|:..|..:|.|:||:|..||...:.:|.||||.::|..|.:||.||||||
 Worm    66 WDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDL 130

  Fly   131 PNAMTAAELTDKLRLNQLRN-RHWFIQSTCATQGHGLYEGLDWLSAEL 177
            |.||..||::.:|.|..||. |.|.|...||.:|.||.|.|:|::..|
 Worm   131 PGAMNPAEVSTQLGLQTLRGARKWQINGCCAVKGEGLPEALEWIANNL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 83/178 (47%)
arl-5NP_001379051.1 Arl5_Arl8 3..177 CDD:133353 80/173 (46%)

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