DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl-3

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_497037.1 Gene:arl-3 / 175121 WormBaseID:WBGene00000188 Length:184 Species:Caenorhabditis elegans


Alignment Length:163 Identity:76/163 - (46%)
Similarity:110/163 - (67%) Gaps:1/163 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETV-EYKNICFTVWDVGGQDKIRPLWR 79
            :::|||::|||.|||||||.:|...::....||.||||:|| ...:|...|||:|||..|||.|.
 Worm    16 REIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIRPYWS 80

  Fly    80 HYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLR 144
            :|::|...||||:||||:.|..|...||..:|.|::||...:|:|||||||..|.::.|:|.||.
 Worm    81 NYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEITRKLN 145

  Fly   145 LNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177
            |:.||:|.|.||:..|.:..|:.:|:.|:::.|
 Worm   146 LDLLRDRTWHIQACSALKNEGINDGITWVASNL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 76/163 (47%)
arl-3NP_497037.1 Arl3 3..177 CDD:206721 75/160 (47%)

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