DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arf4 and arl13a

DIOPT Version :10

Sequence 1:NP_524631.1 Gene:Arf4 / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster
Sequence 2:XP_004916817.1 Gene:arl13a / 100499404 XenbaseID:XB-GENE-1007191 Length:422 Species:Xenopus tropicalis


Alignment Length:170 Identity:46/170 - (27%)
Similarity:85/170 - (50%) Gaps:13/170 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KQMRILMVGLDAAGKTTILYKLKL---GEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPL 77
            :.:.|:.:|||.|||::|:..::.   .:::::.....|..| :.......|:.::.|..|.|..
 Frog    47 RPVTIIFLGLDNAGKSSIIRVIRRVPPCQVLSSAHVDPFRTE-IRLDRFDLTLLEMPGGQKNRAS 110

  Fly    78 WRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDK 142
            ||.|:.....|:||||::|..|:.|....|.::|:...:....||:.|||||..:::..:|:.:.
 Frog   111 WRLYYTQAHALVFVVDASDPGRMKEVACVLASVLRHPCVAGKPLLILANKQDKSSSLLTSEIIEL 175

  Fly   143 LRLNQLRNR---HWFIQSTCA----TQGH--GLYEGLDWL 173
            |.|..|.|.   |..|:...|    :..|  |:.:.|.|:
 Frog   176 LSLETLVNENKTHCRIEPCSAGAEFSSQHDWGVLKALRWV 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arf4NP_524631.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 46/170 (27%)
arl13aXP_004916817.1 P-loop containing Nucleoside Triphosphate Hydrolases 50..217 CDD:476819 46/167 (28%)

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