DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Arf102F and trim23

DIOPT Version :9

Sequence 1:	NP_001259087.1	Gene:	Arf102F / 43823	FlyBaseID:	FBgn0013749	Length:	180	Species:	Drosophila melanogaster
Sequence 2:	XP_002934252.2	Gene:	trim23 / 100490191	XenbaseID:	XB-GENE-984755	Length:	577	Species:	Xenopus tropicalis

Alignment Length:	164	Identity:	96/164 - (58%)
Similarity:	128/164 - (78%)	Gaps:	1/164 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWR 79
            |.::|::.:|||.|||||||:|||..|.:..|||||||||||||||:.||:|||||:.|:||||:
Frog   405 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWK 469

  Fly    80 HYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLR 144
            ||:.|||.::||:||:.|:|:|||..||..:|.|.|||||:||:||||||:..|::..|:|:.|.
Frog   470 HYYLNTQAVVFVIDSSHRERVTEAHSELSKLLTEKELRDALLLIFANKQDVTGALSVEEMTELLS 534

  Fly   145 LNQL-RNRHWFIQSTCATQGHGLYEGLDWLSAEL 177
            |::| ..|.|:||...|..|.|||:||||||.:|
Frog   535 LHKLCCGRSWYIQGCDARSGMGLYDGLDWLSRQL 568

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Arf102F	NP_001259087.1	YlqF_related_GTPase	1..180	CDD:424112	96/164 (59%)
trim23	XP_002934252.2	mRING-HC-C3HC3D_TRIM23_C-IX	31..80	CDD:319559
		modified RING-HC finger (C3HC3D-type)	34..78	CDD:319559
		Bbox2_TRIM23_C-IX_rpt1	126..175	CDD:380831
		Bbox2_TRIM23_C-IX_rpt2	177..226	CDD:380832
		BBC	229..373	CDD:128778
		ARD1	409..577	CDD:206723	95/160 (59%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1362554at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010