DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11155 and Ir75b

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:631 Identity:124/631 - (19%)
Similarity:220/631 - (34%) Gaps:166/631 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 HFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAA----ITDGLTGTVQFVEGRRNIFKLDIL 390
            |...|...:|.:.:.....||...||....:|.:...    |....:|||           ||:.
  Fly    30 HLALLAQSKNIFTQFQPLHSDIQLNDDFLNHNILKLGVFLDINCDKSGTV-----------LDMA 83

  Fly   391 KLKQEKIQKVGYWHPDDGVNIS-------DPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTG 448
            ..|:....:..:...|..:|.|       :...|.|:::..:|....::....|.:..:.:.|.|
  Fly    84 SAKRFFSHRYHWLIYDRSMNFSVLESHFKEAQIFVDADVTYVTHDPFSKNFLLYDVYNKGRQLGG 148

  Fly   449 ---------------NLRFEGFCIDL-------------------------------LKAIATQV 467
                           |.|.|.:..:|                               :|.|...:
  Fly   149 ELNITADREIFCNKTNCRVERYLSELYTRSALQHRKSFTGLTMRATAVVTALPLNVSIKEIFDFM 213

  Fly   468 GFQYKIELVPDNMYGV---------------YI-----PETNSWNGIVQELMERRADLAVASMTI 512
            ..:|:|:|......|.               ||     .:.|:..|::.:|:..:||||:|....
  Fly   214 NSKYRIQLDTYARLGYQARQPLRDMLDCKFKYIFRDRWSDGNATGGMIGDLILDKADLAIAPFIY 278

  Fly   513 NYARESVIDFTKPFMNLGIG---ILFKVPTSQPTRLFS--FMNPLAIEIW-----LYVLAAYILV 567
            ::.|..   |.:|.....:.   .:|:.|.|....|.:  |:.|.:..:|     |.:||..:| 
  Fly   279 SFDRAL---FLQPITKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLL- 339

  Fly   568 SFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGC 632
             :..|::.|..  :||.               |:..|.....|....||:.|.|     |.:||.
  Fly   340 -WVTFILERRK--QWKP---------------SLLTSCLLSFGAGCIQGAWLTP-----RSMGGR 381

  Fly   633 WFFFCLIIISSYTANLAAFLTVERMI-----SPIESASDLAEQ-----------TEISYGTLEGG 681
            ..||.|::.|....|....:.|.:::     |.|.:...||:.           |.|...|.|..
  Fly   382 MAFFALMVTSYLMYNYYTSIVVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEP 446

  Fly   682 STMTFFRDSKIGIYQ---KMWRYMENRKTAV-----FVKTYEDGIKRVMEGSYAFLMESTMLDYA 738
            .....:|...:|..:   |:|...|....:|     ||  |..|:..    .|.|:.:    .:.
  Fly   447 DVRDLYRKKVLGSKRSPDKIWIPTEAGVLSVRDQEGFV--YITGVAT----GYEFVRK----HFL 501

  Fly   739 VQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDD 803
            ..:.|.|.:| .|.|:........|.||:.:.|.|:.|.:.|.| :...:::.|..|...|.:.:
  Fly   502 AHQICELNEI-PLRDASHTHTVLAKRSPYAELIKLSELRMLETG-VHFKHERSWMETKLHCYQHN 564

  Fly   804 KSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFCWNSRKNLN 849
            .:.     |:|:|....:|::||..:.|.:.:...|..|:....|:
  Fly   565 HTV-----AVGLEYAAPLFIILLGAIILCMGILGLEVIWHRHCTLH 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 16/83 (19%)
ANF_receptor 61..393 CDD:279440 14/66 (21%)
PBP2_iGluR_Kainate 424..793 CDD:270432 91/468 (19%)
Lig_chan 555..829 CDD:278489 67/302 (22%)
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 75/338 (22%)
Lig_chan 343..585 CDD:278489 62/280 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462805
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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