DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GLR3.3

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_174978.1 Gene:GLR3.3 / 840859 AraportID:AT1G42540 Length:933 Species:Arabidopsis thaliana


Alignment Length:27 Identity:8/27 - (29%)
Similarity:13/27 - (48%) Gaps:3/27 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NQEFRQEKENNLKAVEQSKEDEHQRNI 84
            |.|.|:.::   |.|:.....|..:||
plant    47 NPEIRKNED---KVVDSVVVTELSKNI 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 8/27 (30%)
PBP2_iGluR_Kainate 424..793 CDD:270432
Lig_chan 554..828 CDD:459656
GLR3.3NP_174978.1 PBP1_GABAb_receptor_plant 30..423 CDD:380645 8/27 (30%)
GluR_Plant 464..807 CDD:270404
Blue background indicates that the domain is not in the aligned region.

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