DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GLUR2

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001320141.1 Gene:GLUR2 / 829682 AraportID:AT4G35290 Length:912 Species:Arabidopsis thaliana


Alignment Length:916 Identity:203/916 - (22%)
Similarity:370/916 - (40%) Gaps:175/916 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IILSILVI---------SNALPPVIRVGAIFTEDERESSIES-AFKYAIYRINKEKTLLPNTQL- 81
            ::||.:|:         :...|..:.|||||:....:..:.: |.|.|...:|.:.:.|..::| 
plant     6 VLLSFIVLIGDGMISEGAGLRPRYVDVGAIFSLGTLQGEVTNIAMKAAEEDVNSDPSFLGGSKLR 70

  Fly    82 --VYDIEYVPRDDSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIE-GRIDLEY 143
              .||    .:.:.|.|.......:|....||.||..:::|..:..:.....:|.:. ..:|...
plant    71 ITTYD----AKRNGFLTIMGALQFMETDAVAIIGPQTSIMAHVLSHLANELSVPMLSFTALDPSL 131

  Fly   144 NSKEFS--INLYPSHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLMHSSTETKAEMYIRQASP 206
            ::.:|.  :...||...|..|..:::.|..|::|..:|.:|   .|..:..|....|:..|:.. 
plant   132 SALQFPFFVQTAPSDLFLMRAIAEMISYYGWSEVIALYNDD---DNSRNGITALGDELEGRRCK- 192

  Fly   207 DSYRQVLR----------------AIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFT 255
            .||:.||.                .|:..|...|||:|.|...|..|....:|.|.:..|.::.|
plant   193 ISYKAVLPLDVVITSPREIINELVKIQGMESRVIIVNTFPKTGKKIFEEAQKLGMMEKGYVWIAT 257

  Fly   256 TFDLETYDLEDFRYNSVN------------ITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGS 308
            |:.....|       |||            :...|:...:||:..:.:.:..||.       ||:
plant   258 TWLTSLLD-------SVNPLPAKTAESLRGVLTLRIHTPNSKKKKDFVARWNKLS-------NGT 308

  Fly   309 PYIQTESALMFDSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQ---------TWNDG-ISLYNQ- 362
            ..:.......:|:|:..|..:..| ||:.     .|:|.:||.         :.|.| :|:::| 
plant   309 VGLNVYGLYAYDTVWIIARAVKRL-LDSR-----ANISFSSDPKLTSMKGGGSLNLGALSIFDQG 367

  Fly   363 -------INAAITDGLTGTVQFVEGRRNIF-KLDILKLKQEKIQKVGYWHPDDGVNISDPTAFY- 418
                   :|..:| |:||.:||:..|..|. ..||:.:..:..:::|||....|::|..|.:.| 
plant   368 SQFLDYIVNTNMT-GVTGQIQFLPDRSMIQPSYDIINVVDDGFRQIGYWSNHSGLSIIPPESLYK 431

  Fly   419 --------DSNIANITLVVMTRE-ERPYVMVKEDK-----------------NLTGNLRFEGFCI 457
                    :.::.|:|....|.| .|.:|.....:                 .|.|:.:.:|:.|
plant   432 KLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVSRLDGSNKVQGYAI 496

  Fly   458 DLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDF 522
            |:.:|....:.:....|.|   ::|..:...| :|..|..:.....|..|..:.|...|..::||
plant   497 DVFEAAVKLISYPVPHEFV---LFGDGLKNPN-FNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDF 557

  Fly   523 TKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHP 587
            |:|::..|:.::..|.....|. ::|:.|....:|....|.:::|...::::......|::.|  
plant   558 TQPYIESGLVVVAPVTKLNDTP-WAFLRPFTPPMWAVTAAFFLIVGSVIWILEHRINDEFRGP-- 619

  Fly   588 CYKETDIVENQFSISNSFWFITGTFL---RQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLA 649
                     .:..|....||...|..   |:    |..:|..|.|...|.|..|||.|||||:|.
plant   620 ---------PRKQIVTILWFSFSTMFFSHRE----NTVSTLGRAVLLIWLFVVLIITSSYTASLT 671

  Fly   650 AFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMEN---------R 705
            :.|||:::.|||.....|...:                  .::|.  ::..|.||         |
plant   672 SILTVQQLNSPIRGVDTLISSS------------------GRVGF--QVGSYAENYMIDELNIAR 716

  Fly   706 KTAVFVKTYEDGIKRVMEGSYAFLM-ESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRD 769
            ...|.:.:.::....:..|:.|.:: |...:|..:...|.....|......|:|.|.|:.||...
plant   717 SRLVPLGSPKEYAAALQNGTVAAIVDERPYVDLFLSEFCGFAIRGQEFTRSGWGFAFPRDSPLAI 781

  Fly   770 KISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVV 834
            .:|.|||.|.|.|.:|.::|||...: :..|.:....:..:..|.:.:..|:|  |:||::..:.
plant   782 DMSTAILGLSETGQLQKIHDKWLSRS-NCSNLNGSVSDEDSEQLKLRSFWGLF--LVCGISCFIA 843

  Fly   835 VAIFEF 840
            :.|:.|
plant   844 LFIYFF 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 95/419 (23%)
ANF_receptor 61..393 CDD:279440 86/384 (22%)
PBP2_iGluR_Kainate 424..793 CDD:270432 92/399 (23%)
Lig_chan 555..829 CDD:278489 67/286 (23%)
GLUR2NP_001320141.1 PBP1_GABAb_receptor_plant 31..422 CDD:380645 95/419 (23%)
GluR_Plant 466..804 CDD:270404 85/377 (23%)
Lig_chan 590..840 CDD:395014 68/287 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I1601
OMA 1 1.010 - - QHG60082
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 1 0.900 - - OOG6_100167
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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