DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GLR1.4

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_187408.2 Gene:GLR1.4 / 819940 AraportID:AT3G07520 Length:861 Species:Arabidopsis thaliana


Alignment Length:933 Identity:180/933 - (19%)
Similarity:351/933 - (37%) Gaps:232/933 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LPPV---IRVGAIFTEDERE-----SSIESAFKYAIYRINKEKTLLPNTQLVYDIEYVPRDDSFR 95
            ||.|   :|:|.:......|     :||..|.. ..|.:|                     :.:|
plant    39 LPVVYEDVRIGLVVDMGSMEGKLVTTSISMALS-DFYHVN---------------------NGYR 81

  Fly    96 TTKKVCSQLEAG--VQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEFSINLYPSHTL 158
            |...|.|:...|  :||:....|.|....|:::.....:...:...:|...:|...|:.:...:.
plant    82 TRVSVLSRDSHGDPLQALAAAMDLLQTEQVEALVGGQSLLEAKNLAELGEKTKVPVISSFQVPSS 146

  Fly   159 LTLAYRDIMVY------------------LNWTKVAIIYEED----------YGLF--NLMHSST 193
            |:||..:..:.                  .:|....:|||:|          .|.|  |.:|  .
plant   147 LSLAKYNYFIQATHDTSSEAKGIAALFSNFDWRTAVLIYEDDDDWRESIQPLVGHFQQNAIH--I 209

  Fly   194 ETKAEMYIRQASPDSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFD 258
            |.|||..: .::.:...:.||..:...|...:...:.......|....:|.|.:..|.::.|...
plant   210 EYKAEFSV-SSNEECIMKQLRKFKASGIRIFVAHISERIANRLFPCARRLGMMEEGYAWILTARS 273

  Fly   259 LETYDLEDFRY----NSVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMF 319
            :..:  :|..|    ....:..|       |.|:.:..::    ||  .|:.....::.|..:..
plant   274 MNNF--QDTNYLAKEEMEGVIGF-------KSYIPLTEEL----HN--FTLRWKRSLRLEEVVTR 323

  Fly   320 DSVYA-FANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINA----AITDGLTGTVQFVE 379
            .||.: :|:.:.:            :|:..::.....|:|:|:.:.|    |...||:|.::|::
plant   324 MSVCSIWAHDIAW------------SLARAAEVAKLPGLSVYDLLEAIPESAKHKGLSGDIKFID 376

  Fly   380 GRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISD-----------PTAFYDSNIANITLVVMTRE 433
            .:....|.:|:.:.....:.||.|  :.|..||:           .|..:......|..:...:|
plant   377 KKFISDKFEIVNMIGRGERSVGLW--NSGSFISNRRRRLSSTKALETIIWPGGSTRIPKIRSLKE 439

  Fly   434 ER-----------------PYVM-VKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNM 480
            :|                 |.:: ||.|.. ||.....|:|||:.:  .:.:.|.|::|      
plant   440 KRHGKKKKLRVLVPAGNITPQILEVKTDFK-TGVTAATGYCIDVFE--TSILPFNYEVE------ 495

  Fly   481 YGVYIP-----ETNSWNGIVQELMER--RADLAVASMTINYARESVIDFTKPFMNLGIGILFKVP 538
               |||     ...::|.:|..|..:  :.|.||..:||...|...:|||.||.::|:.::    
plant   496 ---YIPWPGAINYKNYNDLVYTLYSQKDKYDAAVGDITITDNRSLYVDFTLPFTDMGLAVV---- 553

  Fly   539 TSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISN 603
            |::...::....||.:.:||.:.:.:||....::::.|....:::.  .|::       |.....
plant   554 TAKDKSMWIIFKPLTLSLWLTIASFFILTGAIVWLIERHDNADFQG--SCFQ-------QIGTLL 609

  Fly   604 SFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIES----- 663
            .|.|.|..|..:.   ..:...:|.|...|.|..||:.|:|||.|.:.:||:: |..::|     
plant   610 CFGFSTLVFAHRE---RLQHNMSRFVVIVWIFAVLILTSNYTATLTSVMTVQQ-IRGLKSNENIG 670

  Fly   664 --ASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVMEGSY 726
              ::.:|........|.:|.                  ||..       :||.:|....:..|:.
plant   671 FFSASIAANVVNDNPTFQGP------------------RYKG-------LKTADDFTNALRNGTI 710

  Fly   727 AFLMESTML----------DYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEK 781
            :|:::....          ::.:....::|        .|:|.|..||||...|:|..|.:|:..
plant   711 SFIVDEVPYVKLFVAKHPSEFVIVETESVT--------NGFGFAFQKGSPLVQKVSREIEKLRRT 767

  Fly   782 GIIQILYDKWW--KNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFCWNS 844
            ..::.: :.||  :.|      ...:.|...:.|.|....|:|  ::.|::.|..:.::...||.
plant   768 EKLKAI-ENWWFQRQT------TSATSEDTFHPLTVYTFRGLF--MITGVSFAFALIVYLIPWNR 823

  Fly   845 RKN---LNTENQSLCSEMAEELR 864
            .:.   |...::.:....|.|:|
plant   824 EQRQVVLKHFHRYVSHRFAREIR 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 73/411 (18%)
ANF_receptor 61..393 CDD:279440 64/372 (17%)
PBP2_iGluR_Kainate 424..793 CDD:270432 87/412 (21%)
Lig_chan 555..829 CDD:278489 56/292 (19%)
GLR1.4NP_187408.2 PBP1_GABAb_receptor 47..410 CDD:107361 75/416 (18%)
ANF_receptor 64..390 CDD:279440 66/377 (18%)
GluR_Plant 448..778 CDD:270404 83/392 (21%)
Periplasmic_Binding_Protein_Type_2 476..>657 CDD:304360 50/207 (24%)
Lig_chan 570..810 CDD:278489 57/294 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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