DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GLR1.1

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_187061.1 Gene:GLR1.1 / 819566 AraportID:AT3G04110 Length:808 Species:Arabidopsis thaliana


Alignment Length:937 Identity:189/937 - (20%)
Similarity:349/937 - (37%) Gaps:234/937 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KICCSYIILSILVISNALPP-------VIRVGAIFTEDERESSI-ESAFKYAI---YRINKEKTL 75
            :|..|..||::|.......|       .:|||.:......:..| |::|..|:   |.||     
plant     2 EILFSISILALLFSGVVAAPSDDDVFEEVRVGLVVDLSSIQGKILETSFNLALSDFYGIN----- 61

  Fly    76 LPNTQLVYDIEYVPRDDSFRTTKKVCSQLEAG--VQAIFGPTDALLASHVQSICEAYDIPHIEGR 138
                            :.:||...|..:...|  :.|:...||.|..:..::|..|..:...:..
plant    62 ----------------NGYRTRVSVLVRDSQGDPIIALAAATDLLKNAKAEAIVGAQSLQEAKLL 110

  Fly   139 IDLEYNSKEFSINLYPSHTLLTLAYRDIMVYLNWT--------------------KVAIIYE--- 180
            ..:...:|...|:.:..:||....|.:   ::.||                    .|.:|||   
plant   111 ATISEKAKVPVISTFLPNTLSLKKYDN---FIQWTHDTTSEAKGITSLIQDFSCKSVVVIYEDAD 172

  Fly   181 -------------EDYGLFNLMHSSTETKAEMYIRQASPDSYRQVLRAIRQKEIYKIIVDTNPSH 232
                         :|.|::      ....|...:..:..:.....||.::.......:|..:...
plant   173 DWSESLQILVENFQDKGIY------IARSASFAVSSSGENHMMNQLRKLKVSRASVFVVHMSEIL 231

  Fly   233 IKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYL----EVINQ 293
            :...|:.:.:|.:.:..:.::.|...:..  ||.|.     ||......:..|.|:    ||.|.
plant   232 VSRLFQCVEKLGLMEEAFAWILTARTMNY--LEHFA-----ITRSMQGVIGFKSYIPVSEEVKNF 289

  Fly   294 MQKLQHN-GLDTINGSPYIQTESALMF------DSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQ 351
            ..:|:.. |.||       :||.:.:.      |.....||.:        :.|   ::|...:.
plant   290 TSRLRKRMGDDT-------ETEHSSVIIGLRAHDIACILANAV--------EKF---SVSGKVEA 336

  Fly   352 TWNDGISLYNQINAAITDGLTGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWH------------ 404
            :.|....|.:.|..:...||:|.:|..:.:......:|:.:.:||.:::|.|.            
plant   337 SSNVSADLLDTIRHSRFKGLSGDIQISDNKFISETFEIVNIGREKQRRIGLWSGGSFSQRRQIVW 401

  Fly   405 PDDGVNISDPTAFYDSNIANITLVVMTREER-PY-VMVKEDKNLTGNLRFEGFCIDLLKAIATQV 467
            |.....|.......:.....:..|::|...: |: |.|:.|.. ||.....|||:::.|..... 
plant   402 PGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPE-TGVNTVSGFCVEVFKTCIAP- 464

  Fly   468 GFQYKIELVP-----DNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFM 527
             |.|::|.:|     ||:  .|:..|          ...:.|.||..:||...|...:|||.|:.
plant   465 -FNYELEFIPYRGNNDNL--AYLLST----------QRDKYDAAVGDITITSNRSLYVDFTLPYT 516

  Fly   528 NLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKET 592
            ::|||||.....||  .:::|.:|....:||...|.::|....::::.|....|::...      
plant   517 DIGIGILTVKKKSQ--GMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVNPEFQGSW------ 573

  Fly   593 DIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERM 657
               ..|.|:...|.|.|..|..:.   ..:..|:|.:...|.|..||:.|||:|||.:..|:.||
plant   574 ---GQQLSMMLWFGFSTIVFAHRE---KLQKMSSRFLVIVWVFVVLILTSSYSANLTSTKTISRM 632

  Fly   658 ISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVM 722
                          ::::..:.||||.:.  .:|:|                       .|..| 
plant   633 --------------QLNHQMVFGGSTTSM--TAKLG-----------------------SINAV- 657

  Fly   723 EGSYAFLMESTMLDYAVQRDCNLTQIGG-----------LLDSKGYGIATPKGSPWRDKISLAIL 776
             .:||.|:....|::.:.....|:.:.|           :.::.|:|....|||....|:|..|.
plant   658 -EAYAQLLRDGTLNHVINEIPYLSILIGNYPNDFVMTDRVTNTNGFGFMFQKGSDLVPKVSREIA 721

  Fly   777 ELQEKGIIQILYDKWWK---------NTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALA 832
            :|:..|:::.:..||::         ||.:|.:.:|..:.||  ......:.|:|::  .|.|..
plant   722 KLRSLGMLKDMEKKWFQKLDSLNVHSNTEEVASTNDDDEASK--RFTFRELRGLFII--AGAAHV 782

  Fly   833 VVVAIFEFCWNSRKNLNTENQSLCSEM 859
            :|:|:..|      :...|...||:::
plant   783 LVLALHLF------HTRQEVSRLCTKL 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 74/430 (17%)
ANF_receptor 61..393 CDD:279440 64/383 (17%)
PBP2_iGluR_Kainate 424..793 CDD:270432 92/386 (24%)
Lig_chan 555..829 CDD:278489 61/293 (21%)
GLR1.1NP_187061.1 PBP1_GABAb_receptor 31..397 CDD:107361 73/420 (17%)
ANF_receptor 45..377 CDD:279440 66/386 (17%)
Periplasmic_Binding_Protein_Type_2 421..737 CDD:304360 91/385 (24%)
Lig_chan 542..781 CDD:278489 62/295 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

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