DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and GLR3.5

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001324013.1 Gene:GLR3.5 / 817800 AraportID:AT2G32390 Length:953 Species:Arabidopsis thaliana


Alignment Length:926 Identity:214/926 - (23%)
Similarity:375/926 - (40%) Gaps:174/926 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 SNALPPVIRVGAIFTEDE---RESSIESAFKYAIYRINKEKTLLPNTQLVYDIEYVPRD---DSF 94
            |::||..:.|||:||.|.   |.:.:  ||..||..||.::::|..|:|    ..|.:|   ..|
plant    41 SSSLPSSVNVGALFTYDSFIGRAAKL--AFVAAIEDINADQSILRGTKL----NIVFQDTNCSGF 99

  Fly    95 RTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIE-GRIDLEYNSKEFSINLYPSHTL 158
            ..|......:|..|.|..||..:.:...:..:.....:|.:. ...|...:|.:     ||....
plant   100 VGTMGALQLMENKVVAAIGPQSSGIGHIISHVANELHVPFLSFAATDPTLSSLQ-----YPYFLR 159

  Fly   159 LTL-------AYRDIMVYLNWTK-VAIIYEEDY---GLFNLMHSSTETKAEMYIRQASP-----D 207
            .|.       |..|.:.|..|.: |||..:::|   |:..|..:..:.:|::..:.|.|     .
plant   160 TTQNDYFQMNAITDFVSYFRWREVVAIFVDDEYGRNGISVLGDALAKKRAKISYKAAFPPGADNS 224

  Fly   208 SYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYD-LEDFRYNS 271
            |...:|.::...|....:|..||....:.|.....|.|....|.::.|.:.|...| :|.....:
plant   225 SISDLLASVNLMESRIFVVHVNPDSGLNIFSVAKSLGMMGSGYVWITTDWLLTALDSMEPLDPRA 289

  Fly   272 VN----ITAFR--LVDVDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFA---- 326
            ::    :.|||  ..:.|:||..:  .:.:.|:..  :::.......:.:...:|||:..|    
plant   290 LDLLQGVVAFRHYTPESDNKRQFK--GRWKNLRFK--ESLKSDDGFNSYALYAYDSVWLVARALD 350

  Fly   327 ------NGLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVEGRRNIF 385
                  |.:.|.|..:.:|.....:..:....:|:|......|......||||.::|...:..|.
plant   351 VFFSQGNTVTFSNDPSLRNTNDSGIKLSKLHIFNEGERFLQVILEMNYTGLTGQIEFNSEKNRIN 415

  Fly   386 -KLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITLVVMTREER------PYVMVK-- 441
             ..|||.:|.....:||||....|.:::.|...| |..:|.:    .:::|      |..::|  
plant   416 PAYDILNIKSTGPLRVGYWSNHTGFSVAPPETLY-SKPSNTS----AKDQRLNEIIWPGEVIKPP 475

  Fly   442 ---------------------------EDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDN 479
                                       :|||..|   .:|||||:         |:..|:|:|..
plant   476 RGWVFPENGKPLKIGVPNRVSYKNYASKDKNPLG---VKGFCIDI---------FEAAIQLLPYP 528

  Fly   480 MYGVYI-----PETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGIL--FKV 537
            :...||     .:..|::.::.|:.....|:||..:||...|...:|||:||:..|:.::  .|.
plant   529 VPRTYILYGDGKKNPSYDNLISEVAANIFDVAVGDVTIITNRTKFVDFTQPFIESGLVVVAPVKG 593

  Fly   538 PTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSIS 602
            ..|.|   :||:.|..||:|....|.::.|...::::......|::.|           .:..|.
plant   594 AKSSP---WSFLKPFTIEMWAVTGALFLFVGAVIWILEHRFNEEFRGP-----------PRRQII 644

  Fly   603 NSFWFITGTFL---RQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESA 664
            ..|||...|..   |:    |..:|..|.|...|.|..|||.|||||:|.:.|||:::.|.||..
plant   645 TVFWFSFSTMFFSHRE----NTVSTLGRFVLLVWLFVVLIINSSYTASLTSILTVQQLTSRIEGM 705

  Fly   665 SDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENR-----KTAVFVKTYEDGIKRVME- 723
            ..|....| ..|..:|    ||           .|:::.|.     ...:.:|..|:.:..:.. 
plant   706 DTLIASNE-PIGVQDG----TF-----------AWKFLVNELNIAPSRIIPLKDEEEYLSALQRG 754

  Fly   724 ---GSYAFLMESTMLDYAV--QRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEKGI 783
               |..|.:::......|:  ..:|....:|......|:|.|..:.||....:|.|||:|.|:|.
plant   755 PRGGGVAAIVDELPYIKALLSNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLAEEGK 819

  Fly   784 IQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFCWNSRKNL 848
            ::.:..||.....: |.......|:  ..:.|::..|:|  |:||:...:.:.:  |||    .:
plant   820 LEKIRKKWLTYDHE-CTMQISDTEN--YQISVQSFWGLF--LICGVVWFIALTL--FCW----KV 873

  Fly   849 NTENQSLCSEMAEELR 864
            ..:.|.|..|.::|::
plant   874 FWQYQRLRPEESDEVQ 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 91/406 (22%)
ANF_receptor 61..393 CDD:279440 78/369 (21%)
PBP2_iGluR_Kainate 424..793 CDD:270432 102/424 (24%)
Lig_chan 555..829 CDD:278489 69/287 (24%)
GLR3.5NP_001324013.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 1 0.900 - - OOG6_100167
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.820

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