DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and grik1a

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:882 Identity:399/882 - (45%)
Similarity:550/882 - (62%) Gaps:64/882 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VIRVGAIF--TEDERESSIESAFKYAIYRINKEKTLLPNTQLVYDIEYVPRDDSFRTTKKVCSQL 104
            |||:|.||  .|:|..|..|.|||:|:..||:.:||:|||.|.|||:.|...|||..:::||.||
Zfish    38 VIRIGGIFETRENEPVSMDELAFKFAVTSINRNRTLMPNTTLTYDIQRVNLFDSFEASRRVCDQL 102

  Fly   105 EAGVQAIFGPTDALLASHVQSICEAYDIPHIEGR-----IDLEYNSKEFSINLYPSHTLLTLAYR 164
            ..||.|:|||:.:...|.|||||.|.::|||:.|     :|   |...|.|||||.:|.::.|..
Zfish   103 ALGVAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVD---NKDNFYINLYPEYTSISRAIL 164

  Fly   165 DIMVYLNWTKVAIIYEEDYGLF---NLMHSSTETKAEMYIRQ---ASPDSYRQVLRAIRQKEIYK 223
            ||:::..|..|.::||:..||.   .|:.:.::...::.|||   ...|| |.:|:.:::::.:.
Zfish   165 DIVIFYKWKCVTVVYEDSTGLMRMQELIKAPSKNNLKIRIRQLPSGGGDS-RPLLKEMKKEKEFY 228

  Fly   224 IIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYL 288
            :|.|.:........:.::.:.|....||:.|||.||...|||.:||:.||:|||||:::|.....
Zfish   229 VIFDCSYQVAAELLKQLMSMGMMTEYYHFFFTTLDLFALDLEPYRYSGVNMTAFRLLNLDDSYVA 293

  Fly   289 EVINQ--MQK-----LQHNGLDTINGSPYIQTESALMFDSVYAFANGLHFLNLDNHQNFYIKNLS 346
            .||.:  |::     ...:||    .|..:.|.:|||:|:|:..|     :.........:.:|.
Zfish   294 SVIQKWSMERQLAPPKPESGL----MSGIMTTAAALMYDAVFMVA-----VASQRATQMTVSSLQ 349

  Fly   347 CTSDQTWNDGISLYNQINAAITDGLTGTVQF--VEGRRNIFKLDILKLKQE-------------- 395
            |...:.|..|....|....|..|||||.:..  .:|.|..|.||::.||::              
Zfish   350 CHRHKPWRYGPRFMNLFKEAQWDGLTGRIVLNKTDGLRKEFNLDLISLKEDGTAKRVADGASRPN 414

  Fly   396 KI-QKVGYWHPDDGVN---ISDPTAFYDSNIANITLVVMTREERPYVMVKE-DKNLTGNLRFEGF 455
            |: .|:|.|:...|:|   |.|.....|| :||.||:|.|..|.||||.|: ||.|.||.||||:
Zfish   415 KLWTKIGVWNSYTGLNLTEIKDNKNITDS-LANRTLIVTTILENPYVMYKKSDKVLYGNDRFEGY 478

  Fly   456 CIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVI 520
            |:||||.::..:||.|:::||.|..||.. .:...|||:|:||::..||||||.:||.|.||.||
Zfish   479 CLDLLKELSNILGFTYEVKLVTDGKYGAQ-NDKGEWNGMVRELIDHIADLAVAPLTITYVREKVI 542

  Fly   521 DFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNP 585
            ||:||||.|||.||::.|......:|||:|||..:||:|||.|.:.||..|||:|||:||||.||
Zfish   543 DFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFVIARFTPYEWYNP 607

  Fly   586 HPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAA 650
            |||...:::|||.|::.||.||.....:||||.|.|||.||||:||.|:||.|||||||||||||
Zfish   608 HPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIWWFFTLIIISSYTANLAA 672

  Fly   651 FLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKTYE 715
            |||||||.|||:||.|||:||.|.||.:..|||||||:.|||..|:|||.:|.:||....||..:
Zfish   673 FLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKNSK 737

  Fly   716 DGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQE 780
            |||.||:...||.|||||.::|..||:|||||:|||:||||||:.||.|||:|||:::|||:|||
Zfish   738 DGITRVLTTDYALLMESTSIEYITQRNCNLTQVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQE 802

  Fly   781 KGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFCWNSR 845
            :|.:.::.:|||:..|  |..:| |||  |:|||||||||:|:||..||.|:|.|||.||.:.|.
Zfish   803 EGKLHMMKEKWWRGNG--CPEED-SKE--ASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSH 862

  Fly   846 KNLNTENQSLCSEMAEELRFAMHCHGS---KSRHRPR 879
            ||.:.|.....|.:.|:|..::.||.:   :.|||.|
Zfish   863 KNSDIEECVSFSAVMEDLGISLRCHKALRKRGRHRGR 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 133/402 (33%)
ANF_receptor 61..393 CDD:279440 118/351 (34%)
PBP2_iGluR_Kainate 424..793 CDD:270432 216/369 (59%)
Lig_chan 555..829 CDD:278489 166/273 (61%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 136/406 (33%)
ANF_receptor 57..398 CDD:279440 119/353 (34%)
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 216/369 (59%)
Lig_chan 577..846 CDD:278489 166/273 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591611
Domainoid 1 1.000 359 1.000 Domainoid score I916
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60082
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100167
Panther 1 1.100 - - O PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.760

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