DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and Ir7f

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster


Alignment Length:782 Identity:139/782 - (17%)
Similarity:249/782 - (31%) Gaps:225/782 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SQLEAGVQAIFGPTDALLASHVQSICEAYDIPHIEGRIDLEYNSKEFSINLYPSHTLLTLAYRDI 166
            |...||.....|...::..|::::           .|||::..    ..|||.:.. |.|...::
  Fly     5 SDSNAGSSLSSGSGYSIYKSYLEN-----------SRIDMQGE----DANLYVARA-LRLVIENV 53

  Fly   167 MVYLNWTKVAIIYEEDYGLFNLMHSSTETKAEMYIRQASPDSYRQV---LRAIRQKEIYKIIVDT 228
            :..|:.|.|..|        :..|..|....| |:.....||:|.|   |..||.    .::|:.
  Fly    54 LAQLSTTLVVTI--------STRHLGTAHWFE-YMMNILMDSWRMVAVQLLRIRP----DLVVNP 105

  Fly   229 NPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVDVDSKRYLEVINQ 293
            .|.      |..:.|.|.| .|..:..|                ||||.. .:.|...|..:.  
  Fly   106 VPG------RKRVSLLMVD-SYQGLLDT----------------NITASN-ANFDDPDYYFIF-- 144

  Fly   294 MQKLQHNGLDTINGSPYIQTESALMFDSVYAFANGLHFLNLDNHQNFYIKNLSCTSDQTWNDGIS 358
            :|...|          .|..|..|:.|...|     ||.   .|.|..|        ||....:.
  Fly   145 LQARDH----------LIPKELQLILDHCLA-----HFW---LHCNVMI--------QTAQVEVL 183

  Fly   359 LYN---QINAAITDGLTGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDS 420
            :|.   ....|........|...:||:               .|.....||.           .|
  Fly   184 VYTYYPYTADACQKAYPIPVNTFDGRK---------------WKASQMFPDK-----------LS 222

  Fly   421 NIANITLVVMTREERPYV-MVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYK---IELVPDNMY 481
            .:....|.|:|..:.|:| :|.:.|:  ...|..||.|.|::.:|.::.|..:   |.|:..|.|
  Fly   223 QMHGCPLTVLTWHQPPFVELVWDPKH--NRSRGSGFEIQLVEHLARRMNFSLELVNIALLRPNAY 285

  Fly   482 GVYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLF 546
            .:   ...|..|.:::|::|..::::........|..::.....:.:..:..:.::...:...|.
  Fly   286 RL---AEGSSEGPIEKLLQRNVNISMGYFRKTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLA 347

  Fly   547 SFMNPLAIEIWLYVLAAYILVSFALFV-MARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITG 610
            ..:.|..:.:|:.:|.| :|:...:.: .||..           .|.|                 
  Fly   348 LLVFPFELSVWMLLLLA-LLIHLGIHLPSARRG-----------NEED----------------- 383

  Fly   611 TFLRQGSGLN-------------PKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIE 662
                .|.||.             |::...|.:...|.:..:.:..||.:.|...:.::...:|..
  Fly   384 ----GGGGLQVVALLLGAALARLPRSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNTPSF 444

  Fly   663 SASD-----------------LAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVF 710
            |...                 |.|..:::.......|..|.|....:.:..:      ||...:|
  Fly   445 SLDQLLAEGFQGICTANTQRLLLEMPQLARDPDSIQSVDTPFDWDVLNVLTR------NRNRKIF 503

  Fly   711 VKTYEDGIKRVMEGS-----YAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDK 770
            ....:|.....:..|     :..:.:...::||                   |:..||.|...:|
  Fly   504 AVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYA-------------------GMYMPKHSFLYEK 549

  Fly   771 ISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIGGVFVV-----LLCGLA 830
            :...|..|...|.|.    .|.:.:....:|.::...:....:....:.|:::|     ||.||.
  Fly   550 MDDDIRRLDASGFIH----AWRRASFASVHRKEQVHMTSRRYINHAKLSGIYMVMAGLYLLAGLL 610

  Fly   831 LA 832
            .|
  Fly   611 FA 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 64/316 (20%)
PBP2_iGluR_Kainate 424..793 CDD:270432 66/408 (16%)
Lig_chan 554..828 CDD:459656 46/314 (15%)
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:473866 24/131 (18%)

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