DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and Ir92a

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster


Alignment Length:717 Identity:139/717 - (19%)
Similarity:255/717 - (35%) Gaps:177/717 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 IYKIIVDTNPSHIKSFFRSILQLQMND----HRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVD 281
            :|.....|.|..::  :.|.|:|.:.:    .|..::...|..:..||||....::|.:.     
  Fly    31 VYNNSASTTPLQLE--YLSALELVLRELSKPIRLQWINVAFLKDLNDLEDQVMGALNSSV----- 88

  Fly   282 VDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESA--LMFDSVYAF----ANGLHFLNLDNHQNF 340
              ::.::.:::|.....|        :.|..|.:|  .:.|..|.|    .:....|.:|..| |
  Fly    89 --TEGFITILSQTHHFIH--------ARYYATRNANVRLKDKRYLFLCEDESPAELLCMDILQ-F 142

  Fly   341 YIKNL-------------------------SCTSDQTWNDG--------ISLYNQINAAI-TDGL 371
            |..:|                         :..|.:..:||        .|.|..||..: |...
  Fly   143 YPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGGAGNKTTSPYRDINFELWTQKF 207

  Fly   372 TGTVQFVEGRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITLVVMTREERP 436
            .|.|    |..:...||.. |..|........:|:..:|:...:..    :.:||.|       |
  Fly   208 VGAV----GNLDALLLDAF-LPNETFANRVELYPNKLLNLQRRSLL----VGSITYV-------P 256

  Fly   437 YVMVK----------------EDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELV-PDNMYGVY 484
            |.:..                .:::||    |:|...:::|..........::|.. .||..|:|
  Fly   257 YTITNYVPAGQGDVDPIHPQWPNRSLT----FDGAEANVMKTFCQVHNCHLRVEAYGADNWGGIY 317

  Fly   485 IPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQP---TRLF 546
              :..|.:|::.::.|:|.::|:..:...|  :.:.:.:.......:.||...|...|   |.:.
  Fly   318 --DNESSDGMLGDIYEQRVEMAIGCIYNWY--DGITETSHTIARSSVTILGPAPAPLPSWRTNIM 378

  Fly   547 SFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDI-VENQFSISNSFWFITG 610
            .|.|    ..||.:::..::....|:.| ::..|..:     |..|.: ..:...:..|...|..
  Fly   379 PFNN----RAWLVLISTLVICGTFLYFM-KYVSYRLR-----YSGTQVKFHHSRKLEKSMLDIFA 433

  Fly   611 TFLRQGSG-LNPKATSTRIVGGCWFFFCLIIISS------YTANLAAFLTVERMISPIESASDLA 668
            .|::|.|. |:....:.|      ||...|:.::      |:..|.:.||.....:|:::....|
  Fly   434 LFIQQPSAPLSFDRFAPR------FFLATILCATITLENIYSGQLKSMLTFPFYSAPVDTIEKWA 492

  Fly   669 EQ-------TEISYGTLEGGSTMT---FFRDSKIGIYQKMWRYMENRKTAVFVKTYEDGIKRVME 723
            :.       :.|...|::.....|   ..|:.::..|.    |:.|   ..|:..|..||:|:..
  Fly   493 QSGWKWSAPSIIWVHTVQSSDLETEQILARNFEVHDYS----YLSN---VSFMPNYGFGIERLSS 550

  Fly   724 GSYA---FLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQEKGIIQ 785
            ||.:   ::....:.:..|..|.........:..:|: |..|       :::..|...||.|   
  Fly   551 GSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGW-ILMP-------ELNKHIRTCQETG--- 604

  Fly   786 ILYDKWWKNTGDVCNRDDKSKE----SKAN---------ALGVENIGGVFVVLLCGLALAVVVAI 837
             ||..|.....|  ...||.|:    ..||         ||.|.||.|...||..|:|.|....:
  Fly   605 -LYFHWELEFID--KYMDKKKQEVLMDLANGHKVKGAPQALDVRNIAGALFVLAFGVAFAGCALV 666

  Fly   838 FE 839
            .|
  Fly   667 AE 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 44/235 (19%)
PBP2_iGluR_Kainate 424..793 CDD:270432 77/409 (19%)
Lig_chan 554..828 CDD:459656 63/307 (21%)
Ir92aNP_001097845.2 None

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