DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and Ir75a

DIOPT Version :10

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster


Alignment Length:733 Identity:137/733 - (18%)
Similarity:268/733 - (36%) Gaps:218/733 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 IMVY---------LNWTKVAIIYEEDYGLFNLMHSSTETKAEMYIRQASPDSYRQVLRAIRQKEI 221
            |:||         |||:.:.:.|        :.|  |:....:|: ....|..:.:|....:::|
  Fly    47 ILVYHQFVQMRGVLNWSHLELSY--------MGH--TQPTLAIYV-DIKCDQTQDLLEEASREQI 100

  Fly   222 YKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMF--TTFDLETYDLEDFRYNSVNITAFRLVDVDS 284
            |                       |.| ||::.  ....||.|||    :...||:    :|.|.
  Fly   101 Y-----------------------NQH-YHWLLVGNQSKLEFYDL----FGLFNIS----IDADV 133

  Fly   285 KRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFANGLHFLNLDNHQNFYIKNLSCTS 349
            . |::     :::|.|.                  |||   |..:|                   
  Fly   134 S-YVK-----EQIQDNN------------------DSV---AYAVH------------------- 152

  Fly   350 DQTWNDGISLYNQINAAITDGLTGTVQ-----FVEGR-RNIFKLDILKLKQEKIQKVGYWHPDDG 408
             ..:|:|..:..|:|      :||:.:     ||..| |::..|       :|..|.|     :.
  Fly   153 -DVYNNGKIIGGQLN------VTGSHEMSCDPFVCRRTRHLSSL-------QKRSKYG-----NR 198

  Fly   409 VNISDPTAFYDSNIANITLVVMTREERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKI 473
            ..::|......:.:....|.:...|...::..:.|.::....|| ||.:.|:..           
  Fly   199 EQLTDVVLRVATVVTQRPLTLSDDELIRFLSQENDTHIDSLARF-GFHLTLILR----------- 251

  Fly   474 ELVPDNMYGVYIPETNSWN------GIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGI- 531
            :|:...|..::   ::||:      |.|..::::.|||   :.|.:.|.|..:.:....:..|. 
  Fly   252 DLLHCKMKFIF---SDSWSKSDVVGGSVGAVVDQTADL---TATPSLATEGRLKYLSAIIETGFF 310

  Fly   532 --GILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDI 594
              ..:|:.|.:...|...|:.|.:..:|........|:...|::             ..|.|...
  Fly   311 RSVCIFRTPHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWI-------------TFYMECKR 362

  Fly   595 VENQF------SISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLT 653
            ::.::      |:.::|....|....|.|.|.|::...|::....|....|:.:.||:.:.:.|.
  Fly   363 MQKRWRLDYLPSLLSTFLISFGAACIQSSSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLL 427

  Fly   654 VERMISPIESASDLAEQTEISYGTLE----GGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKTY 714
            ...:.|.|::...||| :.::.| ||    ..|.:.:.|..:|.::.|.....:.:...:::.. 
  Fly   428 SSPVKSKIKTMRQLAE-SSLTVG-LEPLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELWLPA- 489

  Fly   715 EDGIKRVMEG-SYAFLMESTMLDYA-------VQRDCNLTQIGGLLDSKGYGIATP--------- 762
            |.|:.||.:. .|.::.| |...||       .|..|:|.::          :..|         
  Fly   490 EQGVLRVRDNPGYVYVFE-TSSGYAYVERYFTAQEICDLNEV----------LFRPEQLFYTHLH 543

  Fly   763 KGSPWRDKISLAILELQEKGIIQILYDK---WWKNTGDVCNRDDKSKESKANALGVENIGGVFVV 824
            :.|.:::...|..|.:.|.|:    |.|   :|.:....|     ..::....:|:|.:..:.::
  Fly   544 RNSTYKELFRLRFLRILETGV----YRKQRSYWVHMKLHC-----VAQNFVITVGMEYVAPLLLM 599

  Fly   825 LLCGLALAVVVAIFEFCW 842
            |:|...|.||:.:.|..|
  Fly   600 LICADILVVVILLVELAW 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..413 CDD:380605 49/263 (19%)
PBP2_iGluR_Kainate 424..793 CDD:270432 76/407 (19%)
Lig_chan 554..828 CDD:459656 55/303 (18%)
Ir75aNP_649012.2 Periplasmic_Binding_Protein_Type_2 455..572 CDD:473866 24/132 (18%)

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