DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11155 and Ir68b

DIOPT Version :9

Sequence 1:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster
Sequence 2:NP_648548.1 Gene:Ir68b / 39378 FlyBaseID:FBgn0036250 Length:635 Species:Drosophila melanogaster


Alignment Length:662 Identity:118/662 - (17%)
Similarity:216/662 - (32%) Gaps:208/662 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 TFDLETYDLEDFRYNSVNITAFRLVDVDS-----KRYLEVINQMQKLQHNGLDTINGSPYIQTES 315
            |.::|.::||.|| .:.:::.|::...:.     :|.|:::|..|:.:|                
  Fly    70 TRNMEAHELEPFR-RTDSLSIFQIPAAEKGDSLVRRILDMLNPHQRRKH---------------- 117

  Fly   316 ALMFDSVYAFAN-GLHFLNLDNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVE 379
              |...::.:.| |.|.| |...:..:.|.|             ||   ..|||....||..|  
  Fly   118 --MHKYLFVWPNAGRHQL-LRLFRGSWAKKL-------------LY---GLAITGRENGTFDF-- 161

  Fly   380 GRRNIFKLDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITLVVMTREERPYVMVKEDK 444
                                             ||.|:     ..:.::.....|.||  .::.|
  Fly   162 ---------------------------------DPFAW-----GGLQVIQRLDGEVPY--ARKVK 186

  Fly   445 NLTG-NLRFEGFCIDLL---KAIATQVGFQYKIELVPDNMYG-------VYI-PETN-------- 489
            :|.| .|||..|...|:   ::.....|:| .::.|...:.|       .|: ||.|        
  Fly   187 DLRGYPLRFSMFTDPLMAMPRSPVETAGYQ-AVDGVAARVVGEMLNASVTYVFPEDNESYGRCLP 250

  Fly   490 --SWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPL 552
              ::.|:|.:::......|..|..:.......::...|:....:.::......||..|. |:...
  Fly   251 NGNYTGVVSDIVGGHTHFAPNSRFVLDCIWPAVEVLYPYTRRNLHLVVPASAIQPEYLI-FVRVF 314

  Fly   553 AIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGS 617
            ...:|..:|...::|....:||.|.   :.:.|     ...:::.|.:..........|.:.:.:
  Fly   315 RRTVWYLLLVTLLVVVLVFWVMQRL---QRRIP-----RRGVIQFQATWYEILEMFGKTHVGEPA 371

  Fly   618 GLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDL--------------- 667
            |.....:|.|.....|..|..::.:.|.|.|.:..........::...||               
  Fly   372 GRLSSFSSMRTFLMGWILFSYVLSTIYFAKLESGFVRPSYEEQVDRVDDLVHLDVHIYAVTTMYD 436

  Fly   668 ---AEQTEISYGTLEGGSTMTFFRDSKIGI----YQKMWRYMENRKTAVFVK-----------TY 714
               :..||..||.||..|     |...:||    ||.:.|..:.|  |.|:.           ||
  Fly   437 AVRSALTEHQYGLLENRS-----RQLPLGIATSYYQPVVRRRDRR--AAFIMRDFHARDFLAITY 494

  Fly   715 EDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 779
            :...:|.........:.|.:..|.:                      |:|||:     |..||..
  Fly   495 DSQAERPAYHIAREYLRSMICTYIL----------------------PRGSPF-----LHRLESL 532

  Fly   780 EKGIIQILYDKWWKNTGDVCNR---------------DDKSKESKANALGVEN---------IGG 820
            ..|.::..:.:.|:.. |:..|               |....:|.:|.|.:.|         :.|
  Fly   533 YSGFLEHGFFEHWRQM-DLITRVGASPDAEEFLEDLGDQTDTDSGSNELAIRNKKVVLTLDILQG 596

  Fly   821 VFVVLLCGLALA 832
            .|.:...|:.::
  Fly   597 AFYLWSVGIGIS 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 28/159 (18%)
ANF_receptor 61..393 CDD:279440 28/142 (20%)
PBP2_iGluR_Kainate 424..793 CDD:270432 76/423 (18%)
Lig_chan 555..829 CDD:278489 58/330 (18%)
Ir68bNP_648548.1 Lig_chan 333..607 CDD:278489 56/316 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463129
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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